| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255967
Identifier: 89255967
GI number: 89255967
Start: 548287
End: 548823
Strand: Direct
Name: 89255967
Synonym: FTL_0569
Alternate gene names: NA
Gene position: 548287-548823 (Clockwise)
Preceding gene: 89255960
Following gene: 89255968
Centisome position: 28.92
GC content: 33.89
Gene sequence:
>537_bases ATGAAGAGGGTTATAGCGACAATCTTGGGATTAACTGTAGTTTCTGGAGTATATGCTGATAGCTATACAATGTATGCAAA ACCAGATACTAAGTCACCAAAGCTTGCAACTATAGATGATCAAGATCCAAATTATAAAGCGATTTTCTCAAAAGGTGAAT GGATCGAGGTAGTTGATAATAAAGATGGTAGTGTTGGTTGGGTCAAGCAAAAACCTCAAGATAAAACTTCACAGGCTATT AGCAAAGATCCAATCGAGCAAATGATGGCAAATTTTCAAAAGCAACAACAGTTATTAGATCAACATTTCAACAAAATGTT AGCTAATATTGATCAAAATATTGCTCAAATGCAAGCGCAACCTAATTCAACTAAAGCTAAGAATAATCCGCAAGTTCTTA AAAAATTTAGCTCTATCACAATAAATTCAGATGGTAAAACTGCGAAAATTGTCAAAAAGACTGAGGATGGGAATGGCAAT ATACAAACTGTAGAAAAAGAAATTCCTGCTGATCAATTAGGCACTATTAAGCTTTAG
Upstream 100 bases:
>100_bases TAATTAATAGTTTTGTATCTTGAAAAAATAGCTATAAAACTTATTTAAATAACAAAGACTTTTGTGTATAAAATATTTAT AACAAAAAAAGGAGGCTAAA
Downstream 100 bases:
>100_bases TCAAGTATCTTTTTATACTTAATATTTGTAAGCTAATCTCTTTATGAACGGATTTAAAATCCTATTTTTATAAGTTAGTA TAATAAATGAATAAATAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKRVIATILGLTVVSGVYADSYTMYAKPDTKSPKLATIDDQDPNYKAIFSKGEWIEVVDNKDGSVGWVKQKPQDKTSQAI SKDPIEQMMANFQKQQQLLDQHFNKMLANIDQNIAQMQAQPNSTKAKNNPQVLKKFSSITINSDGKTAKIVKKTEDGNGN IQTVEKEIPADQLGTIKL
Sequences:
>Translated_178_residues MKRVIATILGLTVVSGVYADSYTMYAKPDTKSPKLATIDDQDPNYKAIFSKGEWIEVVDNKDGSVGWVKQKPQDKTSQAI SKDPIEQMMANFQKQQQLLDQHFNKMLANIDQNIAQMQAQPNSTKAKNNPQVLKKFSSITINSDGKTAKIVKKTEDGNGN IQTVEKEIPADQLGTIKL >Mature_178_residues MKRVIATILGLTVVSGVYADSYTMYAKPDTKSPKLATIDDQDPNYKAIFSKGEWIEVVDNKDGSVGWVKQKPQDKTSQAI SKDPIEQMMANFQKQQQLLDQHFNKMLANIDQNIAQMQAQPNSTKAKNNPQVLKKFSSITINSDGKTAKIVKKTEDGNGN IQTVEKEIPADQLGTIKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19786; Mature: 19786
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVIATILGLTVVSGVYADSYTMYAKPDTKSPKLATIDDQDPNYKAIFSKGEWIEVVDN CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCEEEEECCCCEEEEEEC KDGSVGWVKQKPQDKTSQAISKDPIEQMMANFQKQQQLLDQHFNKMLANIDQNIAQMQAQ CCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNSTKAKNNPQVLKKFSSITINSDGKTAKIVKKTEDGNGNIQTVEKEIPADQLGTIKL CCCCCCCCCHHHHHHHHHEEECCCCCEEEEEEECCCCCCCEEEHHHHCCCCCCCCCCC >Mature Secondary Structure MKRVIATILGLTVVSGVYADSYTMYAKPDTKSPKLATIDDQDPNYKAIFSKGEWIEVVDN CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCEEEEECCCCEEEEEEC KDGSVGWVKQKPQDKTSQAISKDPIEQMMANFQKQQQLLDQHFNKMLANIDQNIAQMQAQ CCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNSTKAKNNPQVLKKFSSITINSDGKTAKIVKKTEDGNGNIQTVEKEIPADQLGTIKL CCCCCCCCCHHHHHHHHHEEECCCCCEEEEEEECCCCCCCEEEHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA