Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is mlaE [H]
Identifier: 89255923
GI number: 89255923
Start: 497898
End: 498662
Strand: Reverse
Name: mlaE [H]
Synonym: FTL_0516
Alternate gene names: 89255923
Gene position: 498662-497898 (Counterclockwise)
Preceding gene: 89255924
Following gene: 89255922
Centisome position: 26.3
GC content: 33.73
Gene sequence:
>765_bases GTGACAATATTCAGCAAAGTATATACTCTTACATTCTCTTTGATATATAGCTTAGTAAAATCTCTTAGCTTAATACTTAG AATAGTTATTAGTAAATTGAATATTAGAGATTGTATTATTCAAATAAAAGCTGTCGGAGTTAACTCAATTATTATCATAG TTACATCTGGTGTTTTCATAGGCTTAGTTTTAAGCTTACAGGGCTATTATACCCTATCAAAATTTGGTGCTCATTCATTG CTAGGTGTAATGGTGGCTCTTAGTGTACTTAGAGAACTTGGACCAGTAGTTACAGCGATGCTTTTTGCTGGGCGAGCATG TAGCTCAATAACTTCAGAAATTGGACTAATGAAAGCCACAGATCAAATCAATAGCCTCAAAGTTATGAATGTTAATCCTA TAAGCTTCATATTATCTACAAGGTTTTGGGCATGTATGATAAGTGGTCCTATTTTAGCTCTTATCTTTGCAAGCGTTGCA ATACTTGCAAGTTTCATACTTGCAGAGGCAGCTTTAGGAATTAGTTACGGAGAATTTTGGAGTAATATCCAGTCATCAGT TACAGCTTCTGATATATCTAATGGAATTATCAAGAGCATTGTATTTGCTTTTATAACTGCGTGGATAGCTTTATACCAAG GTTATTATTGTATACCAGACTCAAATGGCATAGCCAAAGCTACTACAAAAACAGTTGTTTATTGCTGTATGAGTATTTTA GGTGCAGATCTTATTTTAACATCGATTATGTTTGGAGGAGTTTGA
Upstream 100 bases:
>100_bases ACAAAACTTTCTAGCTGGTAAACCATTAGATTATAATTATCATAATCATAATGATTTAGAGAAAAATTTCTTTAAAAAAG AGATTCTAGGGAGCTAAGTT
Downstream 100 bases:
>100_bases TGAGGAACAAATATTTTGAGACCTCAGTAGGAATTTTTATAATAATAGGTGTGCTATGCTTGTTATTTTTAACATTTAAA GTCAGTGGCACATCATTTAA
Product: ABC transporter, membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTIFSKVYTLTFSLIYSLVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSL LGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFASVA ILASFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSIL GADLILTSIMFGGV
Sequences:
>Translated_254_residues MTIFSKVYTLTFSLIYSLVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSL LGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFASVA ILASFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSIL GADLILTSIMFGGV >Mature_253_residues TIFSKVYTLTFSLIYSLVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLL GVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFASVAI LASFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSILG ADLILTSIMFGGV
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=213, Percent_Identity=51.6431924882629, Blast_Score=220, Evalue=7e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27218; Mature: 27087
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIFSKVYTLTFSLIYSLVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCEEEEEEHHHHHH GLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQINSLKVMNVNPISFILSTRFWACMISGPILALIFASVAILASFILAEAALGISYGEFW HCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH GADLILTSIMFGGV HHHHHHHHHHHCCC >Mature Secondary Structure TIFSKVYTLTFSLIYSLVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCEEEEEEHHHHHH GLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQINSLKVMNVNPISFILSTRFWACMISGPILALIFASVAILASFILAEAALGISYGEFW HCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH GADLILTSIMFGGV HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]