Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is aroE [H]
Identifier: 89255891
GI number: 89255891
Start: 459641
End: 460486
Strand: Reverse
Name: aroE [H]
Synonym: FTL_0481
Alternate gene names: 89255891
Gene position: 460486-459641 (Counterclockwise)
Preceding gene: 89255892
Following gene: 89255879
Centisome position: 24.29
GC content: 31.09
Gene sequence:
>846_bases ATGTCAGATTTATTTAAAATCCCTCTAAACACTAAAACTAAATTATTATTCTCAACATCTGGAAGTAATTCATCGATACA ACGCCATAATACTGCGATACAAAAACTTGGCTTTAATCTTTGTTATTTTACTTTTAGTGGAGAAATTTCAGCTCAAATCT ATACTGATGCTATTAGAGCCCCTTTTGTAAATGGTGGTACTGTCACTGCTCACAATGGCCTTAAATCTAAAGTAATTCCA TTTTTAGACTATGTTGAACCACTTGCTAAACAAACCTTGGCTGTAAATACTATTATCAACAAAGATGGCAAACTTTATGG TTACAATACTGATTGTTATGGTTTACACACTGCACTTACAAAAGGTATCAAAGAATCTAAACAAGATATCAAAACAGCTA TAATTTATGGCAATGGTGGAGTTTCTGGGGTGGCCTTTAAAGTCTTACAGGACTTAGGTATCAAAGTGACAATTGTTGGT AGAAATGCTGATAAAGTAGCTCAAAAAAGAAAAGAGTTAGGAATAGAAAATATTCCACATTTTGAAGCTCCATATGATTT AGTAATTGATGCTACACCAATATCATCATCACCAGAACTAGAGAAAAATACTCAGTTTATAGATTTAGTTAAGCATGCAA AAATAGTATTTTGTCACGCTATGCCTGAAAAAGATAATAAGAAAAATTATCTTTTAGAATATTGTAACCAAAATGGTATT TTCTATATATCTGGTGAAGATATGTATATTGCTCAACTTATAAAACAGTATAAGCTTTATTTTGAGAACTTAGACTCTCA AAGAAAAATTACTGAGGAAGATATTATTGAGGCTTGGGGATTGTAA
Upstream 100 bases:
>100_bases GATACTATCCAAACAGTAAACTCTAGTGAACTTCCAGGTTTGAAATCTTATTCGTTAATGATTATACACAGTTAGATAGC TTTAAAAAATAGGTAAAAAA
Downstream 100 bases:
>100_bases CAGCAATGCTCGCAAAAAACTGACGACTGTCGACGTTGTTATTCCGATATTGATCGGAAATCTCTTCGCCCACATATTTA TCAGATCCTGAATCAAGTTC
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSDLFKIPLNTKTKLLFSTSGSNSSIQRHNTAIQKLGFNLCYFTFSGEISAQIYTDAIRAPFVNGGTVTAHNGLKSKVIP FLDYVEPLAKQTLAVNTIINKDGKLYGYNTDCYGLHTALTKGIKESKQDIKTAIIYGNGGVSGVAFKVLQDLGIKVTIVG RNADKVAQKRKELGIENIPHFEAPYDLVIDATPISSSPELEKNTQFIDLVKHAKIVFCHAMPEKDNKKNYLLEYCNQNGI FYISGEDMYIAQLIKQYKLYFENLDSQRKITEEDIIEAWGL
Sequences:
>Translated_281_residues MSDLFKIPLNTKTKLLFSTSGSNSSIQRHNTAIQKLGFNLCYFTFSGEISAQIYTDAIRAPFVNGGTVTAHNGLKSKVIP FLDYVEPLAKQTLAVNTIINKDGKLYGYNTDCYGLHTALTKGIKESKQDIKTAIIYGNGGVSGVAFKVLQDLGIKVTIVG RNADKVAQKRKELGIENIPHFEAPYDLVIDATPISSSPELEKNTQFIDLVKHAKIVFCHAMPEKDNKKNYLLEYCNQNGI FYISGEDMYIAQLIKQYKLYFENLDSQRKITEEDIIEAWGL >Mature_280_residues SDLFKIPLNTKTKLLFSTSGSNSSIQRHNTAIQKLGFNLCYFTFSGEISAQIYTDAIRAPFVNGGTVTAHNGLKSKVIPF LDYVEPLAKQTLAVNTIINKDGKLYGYNTDCYGLHTALTKGIKESKQDIKTAIIYGNGGVSGVAFKVLQDLGIKVTIVGR NADKVAQKRKELGIENIPHFEAPYDLVIDATPISSSPELEKNTQFIDLVKHAKIVFCHAMPEKDNKKNYLLEYCNQNGIF YISGEDMYIAQLIKQYKLYFENLDSQRKITEEDIIEAWGL
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 31420; Mature: 31289
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLFKIPLNTKTKLLFSTSGSNSSIQRHNTAIQKLGFNLCYFTFSGEISAQIYTDAIRA CCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCEEEEEEEHHHHC PFVNGGTVTAHNGLKSKVIPFLDYVEPLAKQTLAVNTIINKDGKLYGYNTDCYGLHTALT CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECCCCCHHHHHHHH KGIKESKQDIKTAIIYGNGGVSGVAFKVLQDLGIKVTIVGRNADKVAQKRKELGIENIPH HHHHHHHHCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCC FEAPYDLVIDATPISSSPELEKNTQFIDLVKHAKIVFCHAMPEKDNKKNYLLEYCNQNGI CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCCHHHHHHCCCCCE FYISGEDMYIAQLIKQYKLYFENLDSQRKITEEDIIEAWGL EEECCCCHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHCC >Mature Secondary Structure SDLFKIPLNTKTKLLFSTSGSNSSIQRHNTAIQKLGFNLCYFTFSGEISAQIYTDAIRA CCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCEEEEEEEHHHHC PFVNGGTVTAHNGLKSKVIPFLDYVEPLAKQTLAVNTIINKDGKLYGYNTDCYGLHTALT CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECCCCCHHHHHHHH KGIKESKQDIKTAIIYGNGGVSGVAFKVLQDLGIKVTIVGRNADKVAQKRKELGIENIPH HHHHHHHHCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCC FEAPYDLVIDATPISSSPELEKNTQFIDLVKHAKIVFCHAMPEKDNKKNYLLEYCNQNGI CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCCHHHHHHCCCCCE FYISGEDMYIAQLIKQYKLYFENLDSQRKITEEDIIEAWGL EEECCCCHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA