Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89255875
Identifier: 89255875
GI number: 89255875
Start: 439262
End: 440380
Strand: Reverse
Name: 89255875
Synonym: FTL_0465
Alternate gene names: NA
Gene position: 440380-439262 (Counterclockwise)
Preceding gene: 89255877
Following gene: 89255874
Centisome position: 23.23
GC content: 31.55
Gene sequence:
>1119_bases GTGAAACATAAACTAAAGCTAGTTTTGCTATTTGCTTTTATTTACTTGATTTTATTGTTAGTTTTCTATTACTATCGTAT CCAACATAATTACTCTTTTAGCATATCGACACCTAGAAATGACAGTATTACAAAAAACTTAGATATTAAGACTATAGCTA ATCTAAAATATTTCAAATATAATCATGCCTCATCGATGACAACTATTGACAATAAACTTTTTATCACTTGGTATAGCAGT GATCAAGAAACTGCAACAAATACTAAGATAGTGGTTGCAGTAGCTGAGAAAGTAGCTGGGAAATGGCACTTTAATGAAAT CAAACCAGTTATGAATCGCCAGGAATTCCAATCTATATTTAAGAAATATATCCATCATTTAGGTAATCCAATCATTTATT CACAAGCAAAAAGATTGTGGTTAGTTTTCACATCATCTAGTGGTGGCTGGGTAACTTCTTCTTTAAACATTATGTATTCA GATGATCTAGGTAAAACTTGGAGTCAGCCTAAAACTATACTCTCTTCAAATATTCTCAATTTCAGTACACTTACAAGGGG GGCTGCAATCGAACTAGATAATAATAGATTTGCGATTCCCGTATACAAAGAGTTTAATAATCTGAATGGTAGATGGTTTG TCTTTAATAAAGATGGTGAGCTTATATTTGTTTCAGAGATGACTAATGATGGCGTAAATTTACAACCTACAGTAGTTCCT CTATCAAAAACACACGCTTTAGCACTATATAGACAAATGCATAGCCCTATAAAAAGAATATATACTAACGAAACATCAGA TAGTGGCTTATCGTGGTCAAAAGTAAAACCAACTCAACTAGATAATCCAGATTCTGGTATTGCCGCAATAAAAATACAAA ATGGTATACTTTTAGCTTACAATAATGCTACTGATAGTCGCGCAGATCTTAGTTTAGCATTCAAAGCAGATAATTCTCAA CAATGGCGAAATATCTATACATTCCCAAATAAGATAAAAGGAGAACTTTCATATCCTACCTTTACGCCATATCAAGATAA TATTATTTTGGCATTTTCTGATAAAACTAAAGGAACGATAAGAATTGTTGAGATAAAAGGAGAAAATTCTAATGTTTAA
Upstream 100 bases:
>100_bases TTAAAATAGTTAAACTTTATAGATATTTATACGCAAAAATTAGTATATTTAGCTTAATTAAATTACAATAGCACAATATA CTTACTTAATTTTTAAAACT
Downstream 100 bases:
>100_bases TAATTATAACCTTTTGACAACAAACCTCTTTGTTGTCTATCTTATTTTAAGAATATTTACTTTTCTACCTAAAAGATTAT TATTACTAGCAATACTAATA
Product: BNR/Asp-box repeat-containing protein
Products: NA
Alternate protein names: BNR/Asp-Box Repeat Protein; Neuraminidase; BNR Repeat-Containing Glycosyl Hydrolase; BNR/Asp Box Repeat-Containing Protein; Inner Membrane Protein
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKHKLKLVLLFAFIYLILLLVFYYYRIQHNYSFSISTPRNDSITKNLDIKTIANLKYFKYNHASSMTTIDNKLFITWYSS DQETATNTKIVVAVAEKVAGKWHFNEIKPVMNRQEFQSIFKKYIHHLGNPIIYSQAKRLWLVFTSSSGGWVTSSLNIMYS DDLGKTWSQPKTILSSNILNFSTLTRGAAIELDNNRFAIPVYKEFNNLNGRWFVFNKDGELIFVSEMTNDGVNLQPTVVP LSKTHALALYRQMHSPIKRIYTNETSDSGLSWSKVKPTQLDNPDSGIAAIKIQNGILLAYNNATDSRADLSLAFKADNSQ QWRNIYTFPNKIKGELSYPTFTPYQDNIILAFSDKTKGTIRIVEIKGENSNV
Sequences:
>Translated_372_residues MKHKLKLVLLFAFIYLILLLVFYYYRIQHNYSFSISTPRNDSITKNLDIKTIANLKYFKYNHASSMTTIDNKLFITWYSS DQETATNTKIVVAVAEKVAGKWHFNEIKPVMNRQEFQSIFKKYIHHLGNPIIYSQAKRLWLVFTSSSGGWVTSSLNIMYS DDLGKTWSQPKTILSSNILNFSTLTRGAAIELDNNRFAIPVYKEFNNLNGRWFVFNKDGELIFVSEMTNDGVNLQPTVVP LSKTHALALYRQMHSPIKRIYTNETSDSGLSWSKVKPTQLDNPDSGIAAIKIQNGILLAYNNATDSRADLSLAFKADNSQ QWRNIYTFPNKIKGELSYPTFTPYQDNIILAFSDKTKGTIRIVEIKGENSNV >Mature_372_residues MKHKLKLVLLFAFIYLILLLVFYYYRIQHNYSFSISTPRNDSITKNLDIKTIANLKYFKYNHASSMTTIDNKLFITWYSS DQETATNTKIVVAVAEKVAGKWHFNEIKPVMNRQEFQSIFKKYIHHLGNPIIYSQAKRLWLVFTSSSGGWVTSSLNIMYS DDLGKTWSQPKTILSSNILNFSTLTRGAAIELDNNRFAIPVYKEFNNLNGRWFVFNKDGELIFVSEMTNDGVNLQPTVVP LSKTHALALYRQMHSPIKRIYTNETSDSGLSWSKVKPTQLDNPDSGIAAIKIQNGILLAYNNATDSRADLSLAFKADNSQ QWRNIYTFPNKIKGELSYPTFTPYQDNIILAFSDKTKGTIRIVEIKGENSNV
Specific function: Unknown
COG id: COG4692
COG function: function code G; Predicted neuraminidase (sialidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42596; Mature: 42596
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKLKLVLLFAFIYLILLLVFYYYRIQHNYSFSISTPRNDSITKNLDIKTIANLKYFKY CCCHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCCCCCCCEEEEECEEEEEE NHASSMTTIDNKLFITWYSSDQETATNTKIVVAVAEKVAGKWHFNEIKPVMNRQEFQSIF CCCCCEEEECCEEEEEEECCCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHCCHHHHHHHH KKYIHHLGNPIIYSQAKRLWLVFTSSSGGWVTSSLNIMYSDDLGKTWSQPKTILSSNILN HHHHHHCCCEEEEECCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHCCCCC FSTLTRGAAIELDNNRFAIPVYKEFNNLNGRWFVFNKDGELIFVSEMTNDGVNLQPTVVP EEHCCCCEEEEECCCEEEEEEHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEE LSKTHALALYRQMHSPIKRIYTNETSDSGLSWSKVKPTQLDNPDSGIAAIKIQNGILLAY CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCEEEEE NNATDSRADLSLAFKADNSQQWRNIYTFPNKIKGELSYPTFTPYQDNIILAFSDKTKGTI CCCCCCCCEEEEEEECCCCHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEE RIVEIKGENSNV EEEEEECCCCCC >Mature Secondary Structure MKHKLKLVLLFAFIYLILLLVFYYYRIQHNYSFSISTPRNDSITKNLDIKTIANLKYFKY CCCHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCCCCCCCEEEEECEEEEEE NHASSMTTIDNKLFITWYSSDQETATNTKIVVAVAEKVAGKWHFNEIKPVMNRQEFQSIF CCCCCEEEECCEEEEEEECCCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHCCHHHHHHHH KKYIHHLGNPIIYSQAKRLWLVFTSSSGGWVTSSLNIMYSDDLGKTWSQPKTILSSNILN HHHHHHCCCEEEEECCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHCCCCC FSTLTRGAAIELDNNRFAIPVYKEFNNLNGRWFVFNKDGELIFVSEMTNDGVNLQPTVVP EEHCCCCEEEEECCCEEEEEEHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEE LSKTHALALYRQMHSPIKRIYTNETSDSGLSWSKVKPTQLDNPDSGIAAIKIQNGILLAY CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCEEEEE NNATDSRADLSLAFKADNSQQWRNIYTFPNKIKGELSYPTFTPYQDNIILAFSDKTKGTI CCCCCCCCEEEEEEECCCCHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEE RIVEIKGENSNV EEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA