Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89255545
Identifier: 89255545
GI number: 89255545
Start: 101192
End: 102064
Strand: Reverse
Name: 89255545
Synonym: FTL_0108
Alternate gene names: NA
Gene position: 102064-101192 (Counterclockwise)
Preceding gene: 89255552
Following gene: 89255543
Centisome position: 5.38
GC content: 29.67
Gene sequence:
>873_bases ATGCAATTATTAAAGCTAAAGCTTTTGCTTTTTCTTATCTTTTTTATTAGCGCTATTTTACTCAATAGTGTTGGTATTGT TATATTACAGTCAGTTACCCATTACAAAGCCACAGAGATTGAAGCTAGTATTCTTGAGGCTTGTAAGGATCTAACAATAG CGGTAGTTTCATTCTCGATTTGCTCATTTATCCCAAGGTTTGGCTATAAAAATTCTATGTTGACTGGATTAGCAATAATT ACTATAGGATGTATTACTATGGTGACCTTCGATAGTTTTTTAACTACTAAGATATTATTTATATTAACTGGAGTGGCTTT TGCCTTAATCAAAGTTTCTGTGTATTCAACAGTTGGTTTGATTACCGATAATTCAAAAGCACATGCTAATTTAATGAGTT TATTAGAAGGCATTTCCCAAATGGGTGTAGTATTGCGTTTTTTTATATTTAGTATATTTATATATTTTGGTAACTGGTTT GGTACTTACTGGTTACTAGCTGGTTTATGTGTTATAGCTTTTCTACTACTTTTATTTACAAAGCTTGATGAATCAGCAGC AAAAATAACCCAAAACTCTAATTTTTTAGCAGATACACTAAATATGCTAAAACTTATAAAGCTACCTATAGTTTTGTTAT TTATTATCAGCGTATTTTTTTATGTATTCATAGAACAAAGCGTACAATCATGGTTACCAACATTTAATACCAAAGTTCTT CATCTTTCTGCATCAACTAGTATATTTATGGCGAGTTTTTTTGCTTTGAATATTACTGCAGGCAGAATCATTTTTGGTTT CATAATGAAGAAAATTGACTGGAAAAAAATTATTCTTATAGCTCTTATCTGCTGTGCAATTTTAATAATATAG
Upstream 100 bases:
>100_bases TCATTCACTAAAGTGAAAAATGCACTGGTTGGAATACAAATCGAAGCACATAACTTTGTTTATTCTTTAATATTTAAATC ATCTATTTTATTTAGTAGCC
Downstream 100 bases:
>100_bases TTAATCCGAGAGTATTTTGTTAAACACATAAGAGATAGCATCACAAAATTTTTCAAAACTATTATTCACTTTTCTAAATA TTTTTTTAAAGTTAGCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Family Transporter; Transporter Facilitator Family; Facilitator Superfamily Transporter; Transporter MFS Superfamily; Facilitator Superfamily Permease
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MQLLKLKLLLFLIFFISAILLNSVGIVILQSVTHYKATEIEASILEACKDLTIAVVSFSICSFIPRFGYKNSMLTGLAII TIGCITMVTFDSFLTTKILFILTGVAFALIKVSVYSTVGLITDNSKAHANLMSLLEGISQMGVVLRFFIFSIFIYFGNWF GTYWLLAGLCVIAFLLLLFTKLDESAAKITQNSNFLADTLNMLKLIKLPIVLLFIISVFFYVFIEQSVQSWLPTFNTKVL HLSASTSIFMASFFALNITAGRIIFGFIMKKIDWKKIILIALICCAILII
Sequences:
>Translated_290_residues MQLLKLKLLLFLIFFISAILLNSVGIVILQSVTHYKATEIEASILEACKDLTIAVVSFSICSFIPRFGYKNSMLTGLAII TIGCITMVTFDSFLTTKILFILTGVAFALIKVSVYSTVGLITDNSKAHANLMSLLEGISQMGVVLRFFIFSIFIYFGNWF GTYWLLAGLCVIAFLLLLFTKLDESAAKITQNSNFLADTLNMLKLIKLPIVLLFIISVFFYVFIEQSVQSWLPTFNTKVL HLSASTSIFMASFFALNITAGRIIFGFIMKKIDWKKIILIALICCAILII >Mature_290_residues MQLLKLKLLLFLIFFISAILLNSVGIVILQSVTHYKATEIEASILEACKDLTIAVVSFSICSFIPRFGYKNSMLTGLAII TIGCITMVTFDSFLTTKILFILTGVAFALIKVSVYSTVGLITDNSKAHANLMSLLEGISQMGVVLRFFIFSIFIYFGNWF GTYWLLAGLCVIAFLLLLFTKLDESAAKITQNSNFLADTLNMLKLIKLPIVLLFIISVFFYVFIEQSVQSWLPTFNTKVL HLSASTSIFMASFFALNITAGRIIFGFIMKKIDWKKIILIALICCAILII
Specific function: Unknown
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32380; Mature: 32380
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLLKLKLLLFLIFFISAILLNSVGIVILQSVTHYKATEIEASILEACKDLTIAVVSFSI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSFIPRFGYKNSMLTGLAIITIGCITMVTFDSFLTTKILFILTGVAFALIKVSVYSTVGL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE ITDNSKAHANLMSLLEGISQMGVVLRFFIFSIFIYFGNWFGTYWLLAGLCVIAFLLLLFT EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLDESAAKITQNSNFLADTLNMLKLIKLPIVLLFIISVFFYVFIEQSVQSWLPTFNTKVL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE HLSASTSIFMASFFALNITAGRIIFGFIMKKIDWKKIILIALICCAILII EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure MQLLKLKLLLFLIFFISAILLNSVGIVILQSVTHYKATEIEASILEACKDLTIAVVSFSI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSFIPRFGYKNSMLTGLAIITIGCITMVTFDSFLTTKILFILTGVAFALIKVSVYSTVGL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE ITDNSKAHANLMSLLEGISQMGVVLRFFIFSIFIYFGNWFGTYWLLAGLCVIAFLLLLFT EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLDESAAKITQNSNFLADTLNMLKLIKLPIVLLFIISVFFYVFIEQSVQSWLPTFNTKVL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE HLSASTSIFMASFFALNITAGRIIFGFIMKKIDWKKIILIALICCAILII EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA