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The map label for this gene is yfhF [C]

Identifier: 89055016

GI number: 89055016

Start: 2524831

End: 2525211

Strand: Direct

Name: yfhF [C]

Synonym: Jann_2525

Alternate gene names: 89055016

Gene position: 2524831-2525211 (Clockwise)

Preceding gene: 89055015

Following gene: 89055017

Centisome position: 58.47

GC content: 57.48

Gene sequence:

>381_bases
ATGTTCGGTATCCCCGGAAAACAGGCCGTCACCATGACGGACAAAGCCGCCAGGCAAATCGCCAAGCTGATGGATCAGGG
CGGGACCCAGGGCCTGCGCATCGGCGTCAAGAAGGGTGGCTGCGCGGGCATGGAATACACAATGGAATATGTGTCCGAGA
TCGACCCGCTGGATGAGGTGGTCGAACAGGATGGTGCCCGCGTGATGATCGCGCCGATGGCACAGATGTTCCTTTTCGGC
ACTGAGATCGACTATGAAGTCAGCCTGCTTGAAGCGTCGTTCCAGTTCCGCAATCCCAACGTCTCGGATGCCTGCGGTTG
CGGCGAGTCGATCAAGTTCAAGGACATGGATGAATTGGCGGCTGCAACTGGCAACAAATGA

Upstream 100 bases:

>100_bases
TGCCGATGATGCAGTGATGCCTGAGCGTTCTACTCAGGCTTGAGAAACGCGGGCCTGGCGCTTACATTGCACATCAGCAG
TTACAGGAAGGCGCAGCGCC

Downstream 100 bases:

>100_bases
GCGTCTCTGACGAAGAGATCGCCCATGCGCTGGAGCTGTTTGACAGTCTCGGCGATCTGACGACCCGCAAGATGATGGGC
GGCTTGTGCATCTATCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MFGIPGKQAVTMTDKAARQIAKLMDQGGTQGLRIGVKKGGCAGMEYTMEYVSEIDPLDEVVEQDGARVMIAPMAQMFLFG
TEIDYEVSLLEASFQFRNPNVSDACGCGESIKFKDMDELAAATGNK

Sequences:

>Translated_126_residues
MFGIPGKQAVTMTDKAARQIAKLMDQGGTQGLRIGVKKGGCAGMEYTMEYVSEIDPLDEVVEQDGARVMIAPMAQMFLFG
TEIDYEVSLLEASFQFRNPNVSDACGCGESIKFKDMDELAAATGNK
>Mature_126_residues
MFGIPGKQAVTMTDKAARQIAKLMDQGGTQGLRIGVKKGGCAGMEYTMEYVSEIDPLDEVVEQDGARVMIAPMAQMFLFG
TEIDYEVSLLEASFQFRNPNVSDACGCGESIKFKDMDELAAATGNK

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=107, Percent_Identity=43.9252336448598, Blast_Score=96, Evalue=6e-21,
Organism=Homo sapiens, GI160420328, Length=110, Percent_Identity=32.7272727272727, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=40.9523809523809, Blast_Score=91, Evalue=2e-20,
Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=42.8571428571429, Blast_Score=87, Evalue=3e-19,
Organism=Escherichia coli, GI1786351, Length=103, Percent_Identity=30.0970873786408, Blast_Score=65, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=105, Percent_Identity=45.7142857142857, Blast_Score=104, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=45.2830188679245, Blast_Score=104, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6323001, Length=101, Percent_Identity=36.6336633663366, Blast_Score=88, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24642263, Length=108, Percent_Identity=46.2962962962963, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13628; Mature: 13628

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGIPGKQAVTMTDKAARQIAKLMDQGGTQGLRIGVKKGGCAGMEYTMEYVSEIDPLDEV
CCCCCCCCEEEECHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHH
VEQDGARVMIAPMAQMFLFGTEIDYEVSLLEASFQFRNPNVSDACGCGESIKFKDMDELA
HHCCCCEEEEHHHHHHHHHCCCCCCEEHEEEHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
AATGNK
HHCCCC
>Mature Secondary Structure
MFGIPGKQAVTMTDKAARQIAKLMDQGGTQGLRIGVKKGGCAGMEYTMEYVSEIDPLDEV
CCCCCCCCEEEECHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHH
VEQDGARVMIAPMAQMFLFGTEIDYEVSLLEASFQFRNPNVSDACGCGESIKFKDMDELA
HHCCCCEEEEHHHHHHHHHCCCCCCEEHEEEHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
AATGNK
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]