Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89054710

Identifier: 89054710

GI number: 89054710

Start: 2225288

End: 2225536

Strand: Reverse

Name: 89054710

Synonym: Jann_2219

Alternate gene names: NA

Gene position: 2225536-2225288 (Counterclockwise)

Preceding gene: 89054711

Following gene: 89054709

Centisome position: 51.54

GC content: 59.04

Gene sequence:

>249_bases
ATGGTCATGTGCGTCATCATTATCCGTGCGCGTAACGACTATGGCGACGACGACGATGGGGGCATCGTGATCCACATCTA
TATGGTCTACGTCATTGGCGTCCTGTTCTCGGCGCTGTTCCTGCTCATGGGCCGCGGCATGGCTCGGGTCGCGCGGCGCT
ACGGCGTGATCAGCTACACCTGTGCCGCACTCTGGATCCTGGGCGCGCCGATCTTCTTTTTATGCCACGGGATATCATGG
CGCCTATGA

Upstream 100 bases:

>100_bases
TTTACGCCCATGCCGCCGAGGTTATGGCCTGCGCGATCGGTGCGGCGCATTTGCGCCAGGACGGACATGGTGGGACCTGG
CCATCGGATGCCTGTCACTG

Downstream 100 bases:

>100_bases
GCTTGTGCCGGGACTGGTTACCATTGCGTGGATCATCGCATTTTCGTGGATGCTGATCGCTGTCGCACGCAATCAAAGTC
GGTAGGAGCCGCCCCATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MVMCVIIIRARNDYGDDDDGGIVIHIYMVYVIGVLFSALFLLMGRGMARVARRYGVISYTCAALWILGAPIFFLCHGISW
RL

Sequences:

>Translated_82_residues
MVMCVIIIRARNDYGDDDDGGIVIHIYMVYVIGVLFSALFLLMGRGMARVARRYGVISYTCAALWILGAPIFFLCHGISW
RL
>Mature_82_residues
MVMCVIIIRARNDYGDDDDGGIVIHIYMVYVIGVLFSALFLLMGRGMARVARRYGVISYTCAALWILGAPIFFLCHGISW
RL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9231; Mature: 9231

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMCVIIIRARNDYGDDDDGGIVIHIYMVYVIGVLFSALFLLMGRGMARVARRYGVISYT
CEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHH
CAALWILGAPIFFLCHGISWRL
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVMCVIIIRARNDYGDDDDGGIVIHIYMVYVIGVLFSALFLLMGRGMARVARRYGVISYT
CEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHH
CAALWILGAPIFFLCHGISWRL
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA