Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054710
Identifier: 89054710
GI number: 89054710
Start: 2225288
End: 2225536
Strand: Reverse
Name: 89054710
Synonym: Jann_2219
Alternate gene names: NA
Gene position: 2225536-2225288 (Counterclockwise)
Preceding gene: 89054711
Following gene: 89054709
Centisome position: 51.54
GC content: 59.04
Gene sequence:
>249_bases ATGGTCATGTGCGTCATCATTATCCGTGCGCGTAACGACTATGGCGACGACGACGATGGGGGCATCGTGATCCACATCTA TATGGTCTACGTCATTGGCGTCCTGTTCTCGGCGCTGTTCCTGCTCATGGGCCGCGGCATGGCTCGGGTCGCGCGGCGCT ACGGCGTGATCAGCTACACCTGTGCCGCACTCTGGATCCTGGGCGCGCCGATCTTCTTTTTATGCCACGGGATATCATGG CGCCTATGA
Upstream 100 bases:
>100_bases TTTACGCCCATGCCGCCGAGGTTATGGCCTGCGCGATCGGTGCGGCGCATTTGCGCCAGGACGGACATGGTGGGACCTGG CCATCGGATGCCTGTCACTG
Downstream 100 bases:
>100_bases GCTTGTGCCGGGACTGGTTACCATTGCGTGGATCATCGCATTTTCGTGGATGCTGATCGCTGTCGCACGCAATCAAAGTC GGTAGGAGCCGCCCCATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MVMCVIIIRARNDYGDDDDGGIVIHIYMVYVIGVLFSALFLLMGRGMARVARRYGVISYTCAALWILGAPIFFLCHGISW RL
Sequences:
>Translated_82_residues MVMCVIIIRARNDYGDDDDGGIVIHIYMVYVIGVLFSALFLLMGRGMARVARRYGVISYTCAALWILGAPIFFLCHGISW RL >Mature_82_residues MVMCVIIIRARNDYGDDDDGGIVIHIYMVYVIGVLFSALFLLMGRGMARVARRYGVISYTCAALWILGAPIFFLCHGISW RL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9231; Mature: 9231
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMCVIIIRARNDYGDDDDGGIVIHIYMVYVIGVLFSALFLLMGRGMARVARRYGVISYT CEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHH CAALWILGAPIFFLCHGISWRL HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVMCVIIIRARNDYGDDDDGGIVIHIYMVYVIGVLFSALFLLMGRGMARVARRYGVISYT CEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHH CAALWILGAPIFFLCHGISWRL HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA