Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054691
Identifier: 89054691
GI number: 89054691
Start: 2210286
End: 2211044
Strand: Reverse
Name: 89054691
Synonym: Jann_2200
Alternate gene names: NA
Gene position: 2211044-2210286 (Counterclockwise)
Preceding gene: 89054692
Following gene: 89054688
Centisome position: 51.21
GC content: 62.45
Gene sequence:
>759_bases ATGACGGTATTCGCACAAGGAATTTTTTTTGCACAGCAATATCAACTTCTTACTCGCTCAATTGATAATCGAGTGGGAAT AAGGGGTCTTGGCCGCTTCGTCGGGCGTGTGATCCTTGCCGGGATCGCGGCATACGCTCTGATCCTGAGCGGGTTGGCCG TCTACATCGCTGCCGCGCCCGGTGAACCGCCGGTGCCAGAGGCCCATGACGCGATCATCTGCCTTGGTGCGGGTCTGTCG CCCACCCAAGGTCCCGATCATGCCGGTCCGGCCTCGCGCGCGCGGGCTGTAACCTGTGCGGGGCTTTATGGTGCAGCTGT AGCCCCCTTGGTGGTGGTCACGGGCGAGGGCATCGCCGATTATCCGGTCTCCACGGCCATGGCACGGGTCCTTATGGATC ATGGTGTGCCCGAGCACGCGATCGTCAATGAGCCCGCCGCCGGATCCACAATCCAGAACGCTGCGTTCAGCGTGCCGCTT TTGCCGACAGAGACGACACGCGTCGTGCTGGTCACACAGCGCTTCCACCTGCCGCGCGCGATTGCGACGTTTCGGATCTT CACGCCGTGGGAGGTGACGGGATATGAGGCGCCACTTCCGGGACAGGATGCGGTCGCGGTTCACGAACGCCGCACGCCCA CCCGGTGGCTCCTGCGGGAGGTGGCCGCCTATGGGTCAAACGCCGTCCGGGTGATGGTCTTTGTGATCACTGGCAGTGTT GGCATTGACCGCGATACGCGGATCGGCTGGTTCAACTAG
Upstream 100 bases:
>100_bases CAGAAGCCGCTACATTCGCCGATAGATTCCGAAGCCGAGTTCAACGCCGAACGGGTAAAAAACCCTGCAATTTCAAGAGG CCCAAGATCTGCCGGTCTTT
Downstream 100 bases:
>100_bases ACAAGGCGGACCCATGCAAGCGCGTCGTTACCGGGCCCCAAGGACCGCAACGGCCATCAAGGCGCGCCCGTAAGGATCAA CGGAACGCCTGGAGCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTVFAQGIFFAQQYQLLTRSIDNRVGIRGLGRFVGRVILAGIAAYALILSGLAVYIAAAPGEPPVPEAHDAIICLGAGLS PTQGPDHAGPASRARAVTCAGLYGAAVAPLVVVTGEGIADYPVSTAMARVLMDHGVPEHAIVNEPAAGSTIQNAAFSVPL LPTETTRVVLVTQRFHLPRAIATFRIFTPWEVTGYEAPLPGQDAVAVHERRTPTRWLLREVAAYGSNAVRVMVFVITGSV GIDRDTRIGWFN
Sequences:
>Translated_252_residues MTVFAQGIFFAQQYQLLTRSIDNRVGIRGLGRFVGRVILAGIAAYALILSGLAVYIAAAPGEPPVPEAHDAIICLGAGLS PTQGPDHAGPASRARAVTCAGLYGAAVAPLVVVTGEGIADYPVSTAMARVLMDHGVPEHAIVNEPAAGSTIQNAAFSVPL LPTETTRVVLVTQRFHLPRAIATFRIFTPWEVTGYEAPLPGQDAVAVHERRTPTRWLLREVAAYGSNAVRVMVFVITGSV GIDRDTRIGWFN >Mature_251_residues TVFAQGIFFAQQYQLLTRSIDNRVGIRGLGRFVGRVILAGIAAYALILSGLAVYIAAAPGEPPVPEAHDAIICLGAGLSP TQGPDHAGPASRARAVTCAGLYGAAVAPLVVVTGEGIADYPVSTAMARVLMDHGVPEHAIVNEPAAGSTIQNAAFSVPLL PTETTRVVLVTQRFHLPRAIATFRIFTPWEVTGYEAPLPGQDAVAVHERRTPTRWLLREVAAYGSNAVRVMVFVITGSVG IDRDTRIGWFN
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26720; Mature: 26589
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFAQGIFFAQQYQLLTRSIDNRVGIRGLGRFVGRVILAGIAAYALILSGLAVYIAAAP CCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC GEPPVPEAHDAIICLGAGLSPTQGPDHAGPASRARAVTCAGLYGAAVAPLVVVTGEGIAD CCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHEEEEHHHHHHHHHCEEEEECCCCCC YPVSTAMARVLMDHGVPEHAIVNEPAAGSTIQNAAFSVPLLPTETTRVVLVTQRFHLPRA CCHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHCEEECCCCCCCCCEEEEEECCCCCCHH IATFRIFTPWEVTGYEAPLPGQDAVAVHERRTPTRWLLREVAAYGSNAVRVMVFVITGSV HHEEEEECCCEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCC GIDRDTRIGWFN CCCCCCCCCCCC >Mature Secondary Structure TVFAQGIFFAQQYQLLTRSIDNRVGIRGLGRFVGRVILAGIAAYALILSGLAVYIAAAP CEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC GEPPVPEAHDAIICLGAGLSPTQGPDHAGPASRARAVTCAGLYGAAVAPLVVVTGEGIAD CCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHEEEEHHHHHHHHHCEEEEECCCCCC YPVSTAMARVLMDHGVPEHAIVNEPAAGSTIQNAAFSVPLLPTETTRVVLVTQRFHLPRA CCHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHCEEECCCCCCCCCEEEEEECCCCCCHH IATFRIFTPWEVTGYEAPLPGQDAVAVHERRTPTRWLLREVAAYGSNAVRVMVFVITGSV HHEEEEECCCEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCC GIDRDTRIGWFN CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA