Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054681
Identifier: 89054681
GI number: 89054681
Start: 2196732
End: 2197169
Strand: Reverse
Name: 89054681
Synonym: Jann_2190
Alternate gene names: NA
Gene position: 2197169-2196732 (Counterclockwise)
Preceding gene: 89054683
Following gene: 89054673
Centisome position: 50.88
GC content: 60.05
Gene sequence:
>438_bases ATGTCCACGACGACCGAACACCCCTTTCCGGATTTCCTGTTTCAAGTGGAAATTGATAACGTCGCCGGGATCGACTTCGC AGAGGTCAGCGGCCTGACATTGGAGACCGATGTGGTGGAGTACCGGACAGGCAGCGCCGGGCGCACGATCAAGATGCCCG GACGCTCCCATACCGGCGACGTGACCTTCAAGCGTGGAATGACCCAGAGCAGCGTGCAGTTATGGGAGTGGTATCAAACG GTTCTCAGCGGCAATGTGGACCGAAGAACGGTGCAGCTGACGTCGCTTAACCTGGCCCGTGAGCCGCAGATCCGCTGGAC CTTCCGGGAGGCCTGGCCACGCAAATACGTGGGGCCGATGTTCGATGCACGCGGTGGCAACGGCGTGGCCATCGAACAGC TCGTGCTTGTCTACGAGGACGTCCGCATCAATCAGTGA
Upstream 100 bases:
>100_bases TGGACGAAAGCCTAACAGAAAATCCCTCTTGCGACACGAAATCTGTGCTAGCCTAGCATGCACTACCATTGCTGCGGGAC CCTTCTTCAGGAGCCAATCG
Downstream 100 bases:
>100_bases GCCCGGTCATGAGCGGTGTCACGGTCCCCGCCACCCGCCTGACCCTGGGCATCGGCTGGAGGACCGGATTTGGGTTGGAC CGGCCCGCGGTCGCGCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Tail Region Protein; Conserved Phage Tail Region Protein; Phage Tail Tube Protein Gp
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSTTTEHPFPDFLFQVEIDNVAGIDFAEVSGLTLETDVVEYRTGSAGRTIKMPGRSHTGDVTFKRGMTQSSVQLWEWYQT VLSGNVDRRTVQLTSLNLAREPQIRWTFREAWPRKYVGPMFDARGGNGVAIEQLVLVYEDVRINQ
Sequences:
>Translated_145_residues MSTTTEHPFPDFLFQVEIDNVAGIDFAEVSGLTLETDVVEYRTGSAGRTIKMPGRSHTGDVTFKRGMTQSSVQLWEWYQT VLSGNVDRRTVQLTSLNLAREPQIRWTFREAWPRKYVGPMFDARGGNGVAIEQLVLVYEDVRINQ >Mature_144_residues STTTEHPFPDFLFQVEIDNVAGIDFAEVSGLTLETDVVEYRTGSAGRTIKMPGRSHTGDVTFKRGMTQSSVQLWEWYQTV LSGNVDRRTVQLTSLNLAREPQIRWTFREAWPRKYVGPMFDARGGNGVAIEQLVLVYEDVRINQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16486; Mature: 16355
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTTEHPFPDFLFQVEIDNVAGIDFAEVSGLTLETDVVEYRTGSAGRTIKMPGRSHTGD CCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCEEECCEEEEECCCCCCEEECCCCCCCCC VTFKRGMTQSSVQLWEWYQTVLSGNVDRRTVQLTSLNLAREPQIRWTFREAWPRKYVGPM EEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEHHHHCCCCCCCCC FDARGGNGVAIEQLVLVYEDVRINQ CCCCCCCCHHHHHHHHHHCCEEECC >Mature Secondary Structure STTTEHPFPDFLFQVEIDNVAGIDFAEVSGLTLETDVVEYRTGSAGRTIKMPGRSHTGD CCCCCCCCCCEEEEEEECCCCCCCHHHCCCCEEECCEEEEECCCCCCEEECCCCCCCCC VTFKRGMTQSSVQLWEWYQTVLSGNVDRRTVQLTSLNLAREPQIRWTFREAWPRKYVGPM EEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEHHHHCCCCCCCCC FDARGGNGVAIEQLVLVYEDVRINQ CCCCCCCCHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA