Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is msrA2 [H]
Identifier: 89054633
GI number: 89054633
Start: 2150255
End: 2150764
Strand: Reverse
Name: msrA2 [H]
Synonym: Jann_2142
Alternate gene names: 89054633
Gene position: 2150764-2150255 (Counterclockwise)
Preceding gene: 89054634
Following gene: 89054623
Centisome position: 49.81
GC content: 59.41
Gene sequence:
>510_bases ATGACGGAACGTGCAGTTTTGGCGGGCGGTTGCTTTTGGGGCATGCAGGATCTGATCCGCAAAATGCCCGGAGTTGAGGC CACGCGCGTGGGTTACACGGGCGGTGATGTGCCCAATGCCACCTATCGCAATCACGGCACCCATGCGGAGGGGATCGAGA TCCTGTTTGATCCGGCCCGCATCAGCTATCGCCAGATTCTGGAGTTCTTTTTCCAGATCCACGATCCGACCACACCAAAC CGCCAGGGCAATGACCGGGGCATGAGCTACCGCAGCGCCATCTATTATGTGGACGATGCGCAAAAAGCTGTTGCCGAGGA TACGATTGCCGATGTGAACGCGTCCGGTCTTTGGCCCGGTGCCGTGGTGACCGAGGTGGAGCCCGCGGGTCCGTTCTGGG ACGCCGAGCCCGAGCATCAGGATTATCTGGAGCGTATTCCTAACGGGTATACCTGCCATTTCGTGCGCCCGGACTGGGTG CTTCCGAAACGATCAACCGCAGCGGAGTAA
Upstream 100 bases:
>100_bases TGCGGTATTGCATCAACTCCGCCTCACTGCGGTTCGTGCATCGCGACGACATGGAAAACGAAGGCTATGGGGCGTATGTT GATCAAGTGGAGGACGTGGC
Downstream 100 bases:
>100_bases CCTATGGCCATTCGACTGATCGCCACCGCAATCCTGATGGGCGCGTCCTATTTCGCCGGCAAAGCGGCCGCGAAACGGGA AGAGACGGAGAGCGGTGAAG
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase 2; Peptide-methionine (S)-S-oxide reductase 2; Peptide Met(O) reductase 2 [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTERAVLAGGCFWGMQDLIRKMPGVEATRVGYTGGDVPNATYRNHGTHAEGIEILFDPARISYRQILEFFFQIHDPTTPN RQGNDRGMSYRSAIYYVDDAQKAVAEDTIADVNASGLWPGAVVTEVEPAGPFWDAEPEHQDYLERIPNGYTCHFVRPDWV LPKRSTAAE
Sequences:
>Translated_169_residues MTERAVLAGGCFWGMQDLIRKMPGVEATRVGYTGGDVPNATYRNHGTHAEGIEILFDPARISYRQILEFFFQIHDPTTPN RQGNDRGMSYRSAIYYVDDAQKAVAEDTIADVNASGLWPGAVVTEVEPAGPFWDAEPEHQDYLERIPNGYTCHFVRPDWV LPKRSTAAE >Mature_168_residues TERAVLAGGCFWGMQDLIRKMPGVEATRVGYTGGDVPNATYRNHGTHAEGIEILFDPARISYRQILEFFFQIHDPTTPNR QGNDRGMSYRSAIYYVDDAQKAVAEDTIADVNASGLWPGAVVTEVEPAGPFWDAEPEHQDYLERIPNGYTCHFVRPDWVL PKRSTAAE
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI208609995, Length=157, Percent_Identity=36.9426751592357, Blast_Score=105, Evalue=1e-23, Organism=Homo sapiens, GI6912516, Length=157, Percent_Identity=36.9426751592357, Blast_Score=105, Evalue=2e-23, Organism=Homo sapiens, GI208609993, Length=107, Percent_Identity=37.3831775700935, Blast_Score=76, Evalue=1e-14, Organism=Escherichia coli, GI1790665, Length=152, Percent_Identity=44.078947368421, Blast_Score=125, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17533973, Length=143, Percent_Identity=41.958041958042, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6320881, Length=165, Percent_Identity=35.7575757575758, Blast_Score=102, Evalue=4e-23, Organism=Drosophila melanogaster, GI24664627, Length=140, Percent_Identity=36.4285714285714, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI45553131, Length=135, Percent_Identity=37.037037037037, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24664631, Length=142, Percent_Identity=35.2112676056338, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 18935; Mature: 18804
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERAVLAGGCFWGMQDLIRKMPGVEATRVGYTGGDVPNATYRNHGTHAEGIEILFDPAR CCCCEEEECHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCHH ISYRQILEFFFQIHDPTTPNRQGNDRGMSYRSAIYYVDDAQKAVAEDTIADVNASGLWPG HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCC AVVTEVEPAGPFWDAEPEHQDYLERIPNGYTCHFVRPDWVLPKRSTAAE CEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure TERAVLAGGCFWGMQDLIRKMPGVEATRVGYTGGDVPNATYRNHGTHAEGIEILFDPAR CCCEEEECHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCHH ISYRQILEFFFQIHDPTTPNRQGNDRGMSYRSAIYYVDDAQKAVAEDTIADVNASGLWPG HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCC AVVTEVEPAGPFWDAEPEHQDYLERIPNGYTCHFVRPDWVLPKRSTAAE CEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]