Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054622
Identifier: 89054622
GI number: 89054622
Start: 2138486
End: 2138905
Strand: Reverse
Name: 89054622
Synonym: Jann_2131
Alternate gene names: NA
Gene position: 2138905-2138486 (Counterclockwise)
Preceding gene: 89054623
Following gene: 89054621
Centisome position: 49.53
GC content: 65.24
Gene sequence:
>420_bases ATGCGCGCGTTCCTGACCGCAACCCTCATCGCAGCCCTCCCTCTGGGGGTTGCGGCACAGGAGGCCCCGAGGCCGCTGAT CATCGAATTGAACCGTATCGTCCCCCTGGAGGGTGCGTGCCGCCTGACCTTCATGGCCCAGAACAACATGGATGTGGACG TGGCGCAGATCGTGTTCGAGACGGTGTTGTTCACGACCCAAGGCGGGGTGGAACGGCTGACGCTGTTCGACATGGGCACG CTGCCCACCGCGCGCCCCCGTGTGCGGGAATTCGATATGCCGGGTCTGGCGTGTGAAGATCTGGGGCGGGTCCTGTTCAA CGGCGTGGACACCTGCACGGGGGATGGGCTGGACGCCACCATGTGTGAAGGCGCGCTATCGCCGGTCAGCCGCGTGGACA GCGTGGAGGTGATCGGATGA
Upstream 100 bases:
>100_bases TCGATAACGTCTTTGACCGCACCTACACTAACGCGCTGGACGGTGACCCCGGACGCGGCATGACGGGCCGCCTGACGGTC GCGCGGGTGTGGAACTTCTG
Downstream 100 bases:
>100_bases TGTTCGAGACGGCTTTGTCCAATATCAGCGGGCTCGTATCCCTTGGCGGGCCCGTCGTCGCCCTTCTTCTGGGGATGTCC TTGGTCGCTTTGTCTTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRAFLTATLIAALPLGVAAQEAPRPLIIELNRIVPLEGACRLTFMAQNNMDVDVAQIVFETVLFTTQGGVERLTLFDMGT LPTARPRVREFDMPGLACEDLGRVLFNGVDTCTGDGLDATMCEGALSPVSRVDSVEVIG
Sequences:
>Translated_139_residues MRAFLTATLIAALPLGVAAQEAPRPLIIELNRIVPLEGACRLTFMAQNNMDVDVAQIVFETVLFTTQGGVERLTLFDMGT LPTARPRVREFDMPGLACEDLGRVLFNGVDTCTGDGLDATMCEGALSPVSRVDSVEVIG >Mature_139_residues MRAFLTATLIAALPLGVAAQEAPRPLIIELNRIVPLEGACRLTFMAQNNMDVDVAQIVFETVLFTTQGGVERLTLFDMGT LPTARPRVREFDMPGLACEDLGRVLFNGVDTCTGDGLDATMCEGALSPVSRVDSVEVIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14899; Mature: 14899
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAFLTATLIAALPLGVAAQEAPRPLIIELNRIVPLEGACRLTFMAQNNMDVDVAQIVFE CCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHH TVLFTTQGGVERLTLFDMGTLPTARPRVREFDMPGLACEDLGRVLFNGVDTCTGDGLDAT HHHHHCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHH MCEGALSPVSRVDSVEVIG HHHHHCCHHHHCCEEEECC >Mature Secondary Structure MRAFLTATLIAALPLGVAAQEAPRPLIIELNRIVPLEGACRLTFMAQNNMDVDVAQIVFE CCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHH TVLFTTQGGVERLTLFDMGTLPTARPRVREFDMPGLACEDLGRVLFNGVDTCTGDGLDAT HHHHHCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHH MCEGALSPVSRVDSVEVIG HHHHHCCHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA