Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054619

Identifier: 89054619

GI number: 89054619

Start: 2137054

End: 2137428

Strand: Reverse

Name: 89054619

Synonym: Jann_2128

Alternate gene names: NA

Gene position: 2137428-2137054 (Counterclockwise)

Preceding gene: 89054620

Following gene: 89054618

Centisome position: 49.5

GC content: 67.2

Gene sequence:

>375_bases
ATGTCGCTGCGCCGCCCGCCCGTCAAACAGGTCCGCGAACCTACGATTGCGCTCATCAACGTGGTCTTCCTGATGCTGAT
CTTCTTTCTCATCGCGGGCTCCGTCGCGCCGCCGCTGGACCCGCGCGTGGCCCTTGTGGACACGACCGAGTTGGAAGGCC
GCGCCCCGCCAGACGCCGCCGTGATCCTGCCCGATGGCACGCTTGAGATGCACGGAGAGGCCATTTCCCTGACCCAGATC
ATCGCCGACGATTCAACGCCGCGCCTTGTGCCGGACCGCGCCCTGCCCGCCGCTGATCTGGTCGCCATCTCCCGCGCCCT
GCGCGAGGCGGGTGCGGAAGAGGTCTGGATCGTGACCGAACGGGGCATGGAATGA

Upstream 100 bases:

>100_bases
GTCAGTGCCGCCGATGATGTGACGTCTCAGCGCCTGGTCGATCTGCTGGTGGCCTTGGCTTCCGTGCCGGACCTGTCCGT
CACCGTGCTGGACTAGCCCC

Downstream 100 bases:

>100_bases
AGGGCGCACGTGCCGTCGGCGTGGTGGCTGCTGTTGCGCTGTCAGGCGGAGTCCACCTGGCCGGGGCCGGATATTTCGCG
CCCGATGTGGTCGAGTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSLRRPPVKQVREPTIALINVVFLMLIFFLIAGSVAPPLDPRVALVDTTELEGRAPPDAAVILPDGTLEMHGEAISLTQI
IADDSTPRLVPDRALPAADLVAISRALREAGAEEVWIVTERGME

Sequences:

>Translated_124_residues
MSLRRPPVKQVREPTIALINVVFLMLIFFLIAGSVAPPLDPRVALVDTTELEGRAPPDAAVILPDGTLEMHGEAISLTQI
IADDSTPRLVPDRALPAADLVAISRALREAGAEEVWIVTERGME
>Mature_123_residues
SLRRPPVKQVREPTIALINVVFLMLIFFLIAGSVAPPLDPRVALVDTTELEGRAPPDAAVILPDGTLEMHGEAISLTQII
ADDSTPRLVPDRALPAADLVAISRALREAGAEEVWIVTERGME

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13387; Mature: 13256

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRRPPVKQVREPTIALINVVFLMLIFFLIAGSVAPPLDPRVALVDTTELEGRAPPDAA
CCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCE
VILPDGTLEMHGEAISLTQIIADDSTPRLVPDRALPAADLVAISRALREAGAEEVWIVTE
EEECCCCEEECCCEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC
RGME
CCCC
>Mature Secondary Structure 
SLRRPPVKQVREPTIALINVVFLMLIFFLIAGSVAPPLDPRVALVDTTELEGRAPPDAA
CCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCE
VILPDGTLEMHGEAISLTQIIADDSTPRLVPDRALPAADLVAISRALREAGAEEVWIVTE
EEECCCCEEECCCEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC
RGME
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA