Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054585
Identifier: 89054585
GI number: 89054585
Start: 2102573
End: 2103448
Strand: Reverse
Name: 89054585
Synonym: Jann_2094
Alternate gene names: NA
Gene position: 2103448-2102573 (Counterclockwise)
Preceding gene: 89054586
Following gene: 89054584
Centisome position: 48.71
GC content: 61.76
Gene sequence:
>876_bases ATGACATGGACTGACCTGAAATCTTCGCTGGCGGCTGAGGGCTATGTGGCCTCGGACGACCTGGCCGTTGCCTTGCAACT GGCGCTGTCTTTGGGCCGTCCGCTGCTGCTGGAAGGCGCGGCAGGCGTTGGCAAAACCGAGATTGCGCGCACGTTGTCTG CGGTGCGCGACACCCGTCTGATCCGGCTGCAGTGCTATGAAGGGCTGGACGCCGCGCAAGCGATCTATGAGTGGAACTAC CAGCGGCAACTCCTGACGATACGCGCCGCATCCGAAGCCGGAGAGACCGGAAAAGCCGTTGAAGACCGCATCTTTTCCCG CGACTTCCTGCTGGAACGTCCCCTGTTGGCGGCGATCACGCAAGAGATGGCCCCGGTTCTGTTGATCGACGAGATTGACC GCGCCGATGAGGAATTCGAGGCCTACCTGCTGGAAATCCTCTCGGACTTTCAGGTCTCCATCCCCGAACTTGGCACGATC ACGGCTGTAACACGGCCAATGGTCGTCCTAACTTCAAACGGCACACGCGATCTGTCGGACGCCCTGCGCCGACGGTGCCT CTATACCTACGTGGAATACCCCGACCGCACGGCGGAGCTGGCCATCCTCAAGGCGCGCTGCCCTGACGTTGAAGCGCGTT TGGCCGAACAGATCATCGGCTTCGTCCAAAGACTGCGGGAGGAAGAATTGGAGAAGACCCCCGGCGTGGCCGAAATGCTG GACTTCGCCGCCGCCCTTATGGGCCTTGGCATCGCGGACCTCACCGACAACCCCGCCGTCTTGCAATCCACCCTGACGAC CCTGCTGAAAACCCAAAGCGACCAGGCCCAGATCACCCGCGAAGTGGCAGGCCGCATCGCTGTCAAAGCCGCATGA
Upstream 100 bases:
>100_bases CCATGACCATTGGCGGATCTGGAAGACCGCGAATGATCTTGGCCTGCACGGATAAGGGACAAGGTCCGGCGGCGCGCGCC CTCGCCGGACCGGTTTTCAC
Downstream 100 bases:
>100_bases GCCGGGTGACGAAATTCGCCGGGCGCGATCCCGGTCCTGCGGCGCGGGTGGCGGGTTTCATCGCGCATCTGCGTGAAAAC GGGCTGCGTCTGGGCGTGGC
Product: AAA_5 ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; AAA_5 ATPase; AAA Family ATPase; MoxR-Like ATPase; AAA ATPase; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; ATPase AAA Family Protein; ATPase Central Domain-Containing Protein; MoxR Family ATPase; ATP-Dependent Protease; Aaa ATPase; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; ATPase Aaa Family; AAA ATPase Family Protein; MoxR-Like ATPase CoxD; ATPase Protein
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MTWTDLKSSLAAEGYVASDDLAVALQLALSLGRPLLLEGAAGVGKTEIARTLSAVRDTRLIRLQCYEGLDAAQAIYEWNY QRQLLTIRAASEAGETGKAVEDRIFSRDFLLERPLLAAITQEMAPVLLIDEIDRADEEFEAYLLEILSDFQVSIPELGTI TAVTRPMVVLTSNGTRDLSDALRRRCLYTYVEYPDRTAELAILKARCPDVEARLAEQIIGFVQRLREEELEKTPGVAEML DFAAALMGLGIADLTDNPAVLQSTLTTLLKTQSDQAQITREVAGRIAVKAA
Sequences:
>Translated_291_residues MTWTDLKSSLAAEGYVASDDLAVALQLALSLGRPLLLEGAAGVGKTEIARTLSAVRDTRLIRLQCYEGLDAAQAIYEWNY QRQLLTIRAASEAGETGKAVEDRIFSRDFLLERPLLAAITQEMAPVLLIDEIDRADEEFEAYLLEILSDFQVSIPELGTI TAVTRPMVVLTSNGTRDLSDALRRRCLYTYVEYPDRTAELAILKARCPDVEARLAEQIIGFVQRLREEELEKTPGVAEML DFAAALMGLGIADLTDNPAVLQSTLTTLLKTQSDQAQITREVAGRIAVKAA >Mature_290_residues TWTDLKSSLAAEGYVASDDLAVALQLALSLGRPLLLEGAAGVGKTEIARTLSAVRDTRLIRLQCYEGLDAAQAIYEWNYQ RQLLTIRAASEAGETGKAVEDRIFSRDFLLERPLLAAITQEMAPVLLIDEIDRADEEFEAYLLEILSDFQVSIPELGTIT AVTRPMVVLTSNGTRDLSDALRRRCLYTYVEYPDRTAELAILKARCPDVEARLAEQIIGFVQRLREEELEKTPGVAEMLD FAAALMGLGIADLTDNPAVLQSTLTTLLKTQSDQAQITREVAGRIAVKAA
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31990; Mature: 31859
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWTDLKSSLAAEGYVASDDLAVALQLALSLGRPLLLEGAAGVGKTEIARTLSAVRDTRL CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHE IRLQCYEGLDAAQAIYEWNYQRQLLTIRAASEAGETGKAVEDRIFSRDFLLERPLLAAIT EEEEECCCCHHHHHHHHCCHHHHEEEEEEHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHH QEMAPVLLIDEIDRADEEFEAYLLEILSDFQVSIPELGTITAVTRPMVVLTSNGTRDLSD HHHCCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCHHHHH ALRRRCLYTYVEYPDRTAELAILKARCPDVEARLAEQIIGFVQRLREEELEKTPGVAEML HHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DFAAALMGLGIADLTDNPAVLQSTLTTLLKTQSDQAQITREVAGRIAVKAA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TWTDLKSSLAAEGYVASDDLAVALQLALSLGRPLLLEGAAGVGKTEIARTLSAVRDTRL CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHE IRLQCYEGLDAAQAIYEWNYQRQLLTIRAASEAGETGKAVEDRIFSRDFLLERPLLAAIT EEEEECCCCHHHHHHHHCCHHHHEEEEEEHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHH QEMAPVLLIDEIDRADEEFEAYLLEILSDFQVSIPELGTITAVTRPMVVLTSNGTRDLSD HHHCCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCHHHHH ALRRRCLYTYVEYPDRTAELAILKARCPDVEARLAEQIIGFVQRLREEELEKTPGVAEML HHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DFAAALMGLGIADLTDNPAVLQSTLTTLLKTQSDQAQITREVAGRIAVKAA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA