Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054580
Identifier: 89054580
GI number: 89054580
Start: 2098633
End: 2099343
Strand: Reverse
Name: 89054580
Synonym: Jann_2089
Alternate gene names: NA
Gene position: 2099343-2098633 (Counterclockwise)
Preceding gene: 89054581
Following gene: 89054579
Centisome position: 48.62
GC content: 65.4
Gene sequence:
>711_bases ATGAATTTGCGGCCTCCCCCTCTCCTCCTGTTGCCCGGTATGATGTGCGATGCGCGGCTTTTTGCGCCACAGATCGCGGC GCTGTCGGCCAGGAGGGCCGTGATGGTCGCCCCTTTGACCGGGCGCGATACCATCGGCGCTCTGGCCCAGGATGTCTTGG GCCAAGCCCCTCAGCAATTCGCGCTTGCGGGCCTCTCGATGGGGGGGATGGTCGCGATGGAGATCATCGCCCGCGCGCCG GACCGTGTGACCCACCTTGCCCTGCTCGACACCAATCCGAAGGCCGAGCCGCCCGCGCGGGCCCGCGCCCGTGCCCCCCA GATCGAGGCCGTGCGCGCTGGCCATCTGCGCCGTGTGATGCGCGATGAGATGAAGCCAAATTATCTGACCGATGGGCCAC GCACGGGTGAGGTCCTGGACCTCTGCATGGCGATGGCGGAGACGTTGGGGCCAGAGGTCTTTGTCCAGCAGTCCCAAGCG CTTGCCACGCGTCCTGATCAACAAGAGGCCTTGAGGCGCGTAAACGTACCGACCCTGATCCTGTGTGGGACCGACGATAC GCTTTGCCCGCCAGGATATCACGAGCTGATGCGCGATCTCATTCCCGGCGCGGAGCTACAGGTCATCCAGGGCGCAGGCC ATTTACCAACGCTGGAGCAGCCCGAGCGGACAACTCAGGCGCTGCAAGGCTGGTTGGAGCGTCCGTGCTGA
Upstream 100 bases:
>100_bases GCATATGGATCAGACCGCATCCCGTGCGGGGTAATCAGCGCCGGGCGGGCACGAGGCCCGCAGTCTTGACGACAGCCGGT TATGGGCGCACCAACACGCC
Downstream 100 bases:
>100_bases TCTTGCTGCGCACCTACGCCATCGCAGCAATTGGCGTCGGCGTCTTCCTGATCGCCCATCTGCCCCTGCCCTTCCTTCTC GGCCCGATCCTTTCGTGCCT
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; 3-Oxoadipate Enol-Lactonase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Family Hydrolase; 3-Oxoadipate Enol-Lactone Hydrolase; Beta-Ketoadipate Enol-Lactone Hydrolase; Alpha/Beta Hydrolase Protein; Beta-Ketoadipate Enol-Lactone Hydrolase Protein; Alpha/Beta Hydrolase Family Protein; Hydrolase Or Acyltransferase; Alpha/Beta Family Hydrolase; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Lipolytic; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Alpha/Beta Fold Family Hydrolase/Acetyltransferase; S33 Family Peptidase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Chloride Peroxidase; Hydrolase Alpha; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MNLRPPPLLLLPGMMCDARLFAPQIAALSARRAVMVAPLTGRDTIGALAQDVLGQAPQQFALAGLSMGGMVAMEIIARAP DRVTHLALLDTNPKAEPPARARARAPQIEAVRAGHLRRVMRDEMKPNYLTDGPRTGEVLDLCMAMAETLGPEVFVQQSQA LATRPDQQEALRRVNVPTLILCGTDDTLCPPGYHELMRDLIPGAELQVIQGAGHLPTLEQPERTTQALQGWLERPC
Sequences:
>Translated_236_residues MNLRPPPLLLLPGMMCDARLFAPQIAALSARRAVMVAPLTGRDTIGALAQDVLGQAPQQFALAGLSMGGMVAMEIIARAP DRVTHLALLDTNPKAEPPARARARAPQIEAVRAGHLRRVMRDEMKPNYLTDGPRTGEVLDLCMAMAETLGPEVFVQQSQA LATRPDQQEALRRVNVPTLILCGTDDTLCPPGYHELMRDLIPGAELQVIQGAGHLPTLEQPERTTQALQGWLERPC >Mature_236_residues MNLRPPPLLLLPGMMCDARLFAPQIAALSARRAVMVAPLTGRDTIGALAQDVLGQAPQQFALAGLSMGGMVAMEIIARAP DRVTHLALLDTNPKAEPPARARARAPQIEAVRAGHLRRVMRDEMKPNYLTDGPRTGEVLDLCMAMAETLGPEVFVQQSQA LATRPDQQEALRRVNVPTLILCGTDDTLCPPGYHELMRDLIPGAELQVIQGAGHLPTLEQPERTTQALQGWLERPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25612; Mature: 25612
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRPPPLLLLPGMMCDARLFAPQIAALSARRAVMVAPLTGRDTIGALAQDVLGQAPQQF CCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCHHHH ALAGLSMGGMVAMEIIARAPDRVTHLALLDTNPKAEPPARARARAPQIEAVRAGHLRRVM HHHHCCCCHHHHHHHHHHCCCHHEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH RDEMKPNYLTDGPRTGEVLDLCMAMAETLGPEVFVQQSQALATRPDQQEALRRVNVPTLI HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE LCGTDDTLCPPGYHELMRDLIPGAELQVIQGAGHLPTLEQPERTTQALQGWLERPC EECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNLRPPPLLLLPGMMCDARLFAPQIAALSARRAVMVAPLTGRDTIGALAQDVLGQAPQQF CCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCHHHH ALAGLSMGGMVAMEIIARAPDRVTHLALLDTNPKAEPPARARARAPQIEAVRAGHLRRVM HHHHCCCCHHHHHHHHHHCCCHHEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH RDEMKPNYLTDGPRTGEVLDLCMAMAETLGPEVFVQQSQALATRPDQQEALRRVNVPTLI HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE LCGTDDTLCPPGYHELMRDLIPGAELQVIQGAGHLPTLEQPERTTQALQGWLERPC EECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA