Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054557
Identifier: 89054557
GI number: 89054557
Start: 2075511
End: 2075918
Strand: Reverse
Name: 89054557
Synonym: Jann_2066
Alternate gene names: NA
Gene position: 2075918-2075511 (Counterclockwise)
Preceding gene: 89054560
Following gene: 89054556
Centisome position: 48.08
GC content: 59.31
Gene sequence:
>408_bases ATGTCCACGCAGATTTACGAGACCATTGAACAAATCCCGACGACTGCACCAAATGTCTACGCGTTCCGCGTGACTGGCCA TATCGACGACGATGCGTCGGAGGCGCTGGCAAAGTTCATGCTGGCCGCGTTTGACCGCCATGAGGAAAAGGTCGACATGC TGCTTGACCTGACGGCGTTCACGGGCAGCGATTGGGACAGCATGCTGGATGGCGACGTTATCAAGTCCCGCTTCCGGTCG CTGTCGGAAGTGCGCCGCTACGCCGTGATTGGTGCCCCTGACCGCGCCGCGAAGATGATCGAGTTCATGGACAAGATCAT CCCGGTCGAGGCGAAAGCGTTCGACGCAAACCAGAAGGATGCAGCCTGGGCCTTCGTCGGTGCGTCCGAGGCGTCTGTTA GCGTCTGA
Upstream 100 bases:
>100_bases GGTTAATCGGGGGTGAAAAATGCAGATCACGGCGCAGGCACGTGGAACCATCGGGGCAAATCGCGAGTTAAGACATCAGC AATCTTAATCGGAGATCAAA
Downstream 100 bases:
>100_bases CCGCGCCCGTCAAACGCGTCTATATCTTTTATCACAGCCCCCGCGCCGTTCCCACGGCACGGGGGCTATTGTTTGATCTC ATGATGTCAAAATACCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSTQIYETIEQIPTTAPNVYAFRVTGHIDDDASEALAKFMLAAFDRHEEKVDMLLDLTAFTGSDWDSMLDGDVIKSRFRS LSEVRRYAVIGAPDRAAKMIEFMDKIIPVEAKAFDANQKDAAWAFVGASEASVSV
Sequences:
>Translated_135_residues MSTQIYETIEQIPTTAPNVYAFRVTGHIDDDASEALAKFMLAAFDRHEEKVDMLLDLTAFTGSDWDSMLDGDVIKSRFRS LSEVRRYAVIGAPDRAAKMIEFMDKIIPVEAKAFDANQKDAAWAFVGASEASVSV >Mature_134_residues STQIYETIEQIPTTAPNVYAFRVTGHIDDDASEALAKFMLAAFDRHEEKVDMLLDLTAFTGSDWDSMLDGDVIKSRFRSL SEVRRYAVIGAPDRAAKMIEFMDKIIPVEAKAFDANQKDAAWAFVGASEASVSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14971; Mature: 14840
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQIYETIEQIPTTAPNVYAFRVTGHIDDDASEALAKFMLAAFDRHEEKVDMLLDLTAF CCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHC TGSDWDSMLDGDVIKSRFRSLSEVRRYAVIGAPDRAAKMIEFMDKIIPVEAKAFDANQKD CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCC AAWAFVGASEASVSV CEEEEEECCCCCCCC >Mature Secondary Structure STQIYETIEQIPTTAPNVYAFRVTGHIDDDASEALAKFMLAAFDRHEEKVDMLLDLTAF CCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHC TGSDWDSMLDGDVIKSRFRSLSEVRRYAVIGAPDRAAKMIEFMDKIIPVEAKAFDANQKD CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCC AAWAFVGASEASVSV CEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA