Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054557

Identifier: 89054557

GI number: 89054557

Start: 2075511

End: 2075918

Strand: Reverse

Name: 89054557

Synonym: Jann_2066

Alternate gene names: NA

Gene position: 2075918-2075511 (Counterclockwise)

Preceding gene: 89054560

Following gene: 89054556

Centisome position: 48.08

GC content: 59.31

Gene sequence:

>408_bases
ATGTCCACGCAGATTTACGAGACCATTGAACAAATCCCGACGACTGCACCAAATGTCTACGCGTTCCGCGTGACTGGCCA
TATCGACGACGATGCGTCGGAGGCGCTGGCAAAGTTCATGCTGGCCGCGTTTGACCGCCATGAGGAAAAGGTCGACATGC
TGCTTGACCTGACGGCGTTCACGGGCAGCGATTGGGACAGCATGCTGGATGGCGACGTTATCAAGTCCCGCTTCCGGTCG
CTGTCGGAAGTGCGCCGCTACGCCGTGATTGGTGCCCCTGACCGCGCCGCGAAGATGATCGAGTTCATGGACAAGATCAT
CCCGGTCGAGGCGAAAGCGTTCGACGCAAACCAGAAGGATGCAGCCTGGGCCTTCGTCGGTGCGTCCGAGGCGTCTGTTA
GCGTCTGA

Upstream 100 bases:

>100_bases
GGTTAATCGGGGGTGAAAAATGCAGATCACGGCGCAGGCACGTGGAACCATCGGGGCAAATCGCGAGTTAAGACATCAGC
AATCTTAATCGGAGATCAAA

Downstream 100 bases:

>100_bases
CCGCGCCCGTCAAACGCGTCTATATCTTTTATCACAGCCCCCGCGCCGTTCCCACGGCACGGGGGCTATTGTTTGATCTC
ATGATGTCAAAATACCTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSTQIYETIEQIPTTAPNVYAFRVTGHIDDDASEALAKFMLAAFDRHEEKVDMLLDLTAFTGSDWDSMLDGDVIKSRFRS
LSEVRRYAVIGAPDRAAKMIEFMDKIIPVEAKAFDANQKDAAWAFVGASEASVSV

Sequences:

>Translated_135_residues
MSTQIYETIEQIPTTAPNVYAFRVTGHIDDDASEALAKFMLAAFDRHEEKVDMLLDLTAFTGSDWDSMLDGDVIKSRFRS
LSEVRRYAVIGAPDRAAKMIEFMDKIIPVEAKAFDANQKDAAWAFVGASEASVSV
>Mature_134_residues
STQIYETIEQIPTTAPNVYAFRVTGHIDDDASEALAKFMLAAFDRHEEKVDMLLDLTAFTGSDWDSMLDGDVIKSRFRSL
SEVRRYAVIGAPDRAAKMIEFMDKIIPVEAKAFDANQKDAAWAFVGASEASVSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14971; Mature: 14840

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQIYETIEQIPTTAPNVYAFRVTGHIDDDASEALAKFMLAAFDRHEEKVDMLLDLTAF
CCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
TGSDWDSMLDGDVIKSRFRSLSEVRRYAVIGAPDRAAKMIEFMDKIIPVEAKAFDANQKD
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCC
AAWAFVGASEASVSV
CEEEEEECCCCCCCC
>Mature Secondary Structure 
STQIYETIEQIPTTAPNVYAFRVTGHIDDDASEALAKFMLAAFDRHEEKVDMLLDLTAF
CCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
TGSDWDSMLDGDVIKSRFRSLSEVRRYAVIGAPDRAAKMIEFMDKIIPVEAKAFDANQKD
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCC
AAWAFVGASEASVSV
CEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA