Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054543

Identifier: 89054543

GI number: 89054543

Start: 2056671

End: 2057351

Strand: Direct

Name: 89054543

Synonym: Jann_2052

Alternate gene names: NA

Gene position: 2056671-2057351 (Clockwise)

Preceding gene: 89054542

Following gene: 89054544

Centisome position: 47.63

GC content: 60.94

Gene sequence:

>681_bases
TTGGAGATCACCTGGTTCGGCCATGCTGCGTTCAAATTGACGGACGCCGAGGGGGTCTCGGTCATCACCGACCCCTATAC
GCCCGACGGCGTGGGCTATCCGCCGATCCGTGAGACAGCGGATGCGGTCATTATCTCGTCCGACGATGACAGCGCCCATT
GCCGCCACGATCTGATCCCCGGCGCGCCGCCGTTCGTCAACGCGCTGGAGATTGCAAAGAACGGCGGTAAGGGCGAGGTC
GCGGGGCTGGCGGTTGCGGCCATTGAGGCCGCTGAATGGGACCACCACCCCGAACACGCCGTGCCGGGGCAGAACGGCAT
GTATCGGTTTGAGATGGACGGCTTGAAAATCGCCCATATGGGCGATGTCGGCAATCCGCTGACACAGGCGCAACAGGACT
TCTTCGCTGACACGGACGTGCTTCTGGCGCTGGCGGGCGGCTATCTGACGATCGAGTTGCCGGACCTGATGGAGATGATC
CACCGGGTGCAGCCGAGGCTGATTATCCCGATGCATTTCCGCACGCTCACCTACAAGCCGCGCAACACCATGTGGATTGA
GAGTTTTCTGGCAAATTTCCGCGATGACGCGGTGGACTTTGTCTGCGACCACACCGCTCAGATCACCAAAGACGATTTGC
CGGACACGACCCGTGTCATGGTGCTCGACTACCTACGATAG

Upstream 100 bases:

>100_bases
CCCGCATGTTGTGGGCAACAACTAGCCCGCTAGCCAACACGCTGGGTGCGATACCGAAGCCATCAGCCCACACGTTGGGG
CGACAAAGAAGGACGACACG

Downstream 100 bases:

>100_bases
TGTCCGCACAACCGGACCAGGATGGATAAGACTTTTAAGGGAGGACTACGAATGAAAAAGACAACTCAGCTGCTTTTGGG
TACGGTCGCGATGACGCTGG

Product: Zn-dependent hydrolase

Products: NA

Alternate protein names: Zn-Dependent Hydrolase Of Beta-Lactamase Fold; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Zn-Dependent Hydrolase; Zn-Dependent Hydrolase Of Beta-Lactamase Fold Protein; Zn-Dependent Hydrolase Of Beta-Lactamase Fold Family

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MEITWFGHAAFKLTDAEGVSVITDPYTPDGVGYPPIRETADAVIISSDDDSAHCRHDLIPGAPPFVNALEIAKNGGKGEV
AGLAVAAIEAAEWDHHPEHAVPGQNGMYRFEMDGLKIAHMGDVGNPLTQAQQDFFADTDVLLALAGGYLTIELPDLMEMI
HRVQPRLIIPMHFRTLTYKPRNTMWIESFLANFRDDAVDFVCDHTAQITKDDLPDTTRVMVLDYLR

Sequences:

>Translated_226_residues
MEITWFGHAAFKLTDAEGVSVITDPYTPDGVGYPPIRETADAVIISSDDDSAHCRHDLIPGAPPFVNALEIAKNGGKGEV
AGLAVAAIEAAEWDHHPEHAVPGQNGMYRFEMDGLKIAHMGDVGNPLTQAQQDFFADTDVLLALAGGYLTIELPDLMEMI
HRVQPRLIIPMHFRTLTYKPRNTMWIESFLANFRDDAVDFVCDHTAQITKDDLPDTTRVMVLDYLR
>Mature_226_residues
MEITWFGHAAFKLTDAEGVSVITDPYTPDGVGYPPIRETADAVIISSDDDSAHCRHDLIPGAPPFVNALEIAKNGGKGEV
AGLAVAAIEAAEWDHHPEHAVPGQNGMYRFEMDGLKIAHMGDVGNPLTQAQQDFFADTDVLLALAGGYLTIELPDLMEMI
HRVQPRLIIPMHFRTLTYKPRNTMWIESFLANFRDDAVDFVCDHTAQITKDDLPDTTRVMVLDYLR

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25016; Mature: 25016

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITWFGHAAFKLTDAEGVSVITDPYTPDGVGYPPIRETADAVIISSDDDSAHCRHDLIP
CEEEEEECEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCC
GAPPFVNALEIAKNGGKGEVAGLAVAAIEAAEWDHHPEHAVPGQNGMYRFEMDGLKIAHM
CCCCHHHHHHHHCCCCCCCHHHHEEEEHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEC
GDVGNPLTQAQQDFFADTDVLLALAGGYLTIELPDLMEMIHRVQPRLIIPMHFRTLTYKP
CCCCCHHHHHHHHHHCCHHHHEEECCCEEEEECHHHHHHHHHCCCCEEEEEEEEEEEECC
RNTMWIESFLANFRDDAVDFVCDHTAQITKDDLPDTTRVMVLDYLR
CCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHEEEEEECC
>Mature Secondary Structure
MEITWFGHAAFKLTDAEGVSVITDPYTPDGVGYPPIRETADAVIISSDDDSAHCRHDLIP
CEEEEEECEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCC
GAPPFVNALEIAKNGGKGEVAGLAVAAIEAAEWDHHPEHAVPGQNGMYRFEMDGLKIAHM
CCCCHHHHHHHHCCCCCCCHHHHEEEEHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEC
GDVGNPLTQAQQDFFADTDVLLALAGGYLTIELPDLMEMIHRVQPRLIIPMHFRTLTYKP
CCCCCHHHHHHHHHHCCHHHHEEECCCEEEEECHHHHHHHHHCCCCEEEEEEEEEEEECC
RNTMWIESFLANFRDDAVDFVCDHTAQITKDDLPDTTRVMVLDYLR
CCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA