Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054543
Identifier: 89054543
GI number: 89054543
Start: 2056671
End: 2057351
Strand: Direct
Name: 89054543
Synonym: Jann_2052
Alternate gene names: NA
Gene position: 2056671-2057351 (Clockwise)
Preceding gene: 89054542
Following gene: 89054544
Centisome position: 47.63
GC content: 60.94
Gene sequence:
>681_bases TTGGAGATCACCTGGTTCGGCCATGCTGCGTTCAAATTGACGGACGCCGAGGGGGTCTCGGTCATCACCGACCCCTATAC GCCCGACGGCGTGGGCTATCCGCCGATCCGTGAGACAGCGGATGCGGTCATTATCTCGTCCGACGATGACAGCGCCCATT GCCGCCACGATCTGATCCCCGGCGCGCCGCCGTTCGTCAACGCGCTGGAGATTGCAAAGAACGGCGGTAAGGGCGAGGTC GCGGGGCTGGCGGTTGCGGCCATTGAGGCCGCTGAATGGGACCACCACCCCGAACACGCCGTGCCGGGGCAGAACGGCAT GTATCGGTTTGAGATGGACGGCTTGAAAATCGCCCATATGGGCGATGTCGGCAATCCGCTGACACAGGCGCAACAGGACT TCTTCGCTGACACGGACGTGCTTCTGGCGCTGGCGGGCGGCTATCTGACGATCGAGTTGCCGGACCTGATGGAGATGATC CACCGGGTGCAGCCGAGGCTGATTATCCCGATGCATTTCCGCACGCTCACCTACAAGCCGCGCAACACCATGTGGATTGA GAGTTTTCTGGCAAATTTCCGCGATGACGCGGTGGACTTTGTCTGCGACCACACCGCTCAGATCACCAAAGACGATTTGC CGGACACGACCCGTGTCATGGTGCTCGACTACCTACGATAG
Upstream 100 bases:
>100_bases CCCGCATGTTGTGGGCAACAACTAGCCCGCTAGCCAACACGCTGGGTGCGATACCGAAGCCATCAGCCCACACGTTGGGG CGACAAAGAAGGACGACACG
Downstream 100 bases:
>100_bases TGTCCGCACAACCGGACCAGGATGGATAAGACTTTTAAGGGAGGACTACGAATGAAAAAGACAACTCAGCTGCTTTTGGG TACGGTCGCGATGACGCTGG
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: Zn-Dependent Hydrolase Of Beta-Lactamase Fold; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Zn-Dependent Hydrolase; Zn-Dependent Hydrolase Of Beta-Lactamase Fold Protein; Zn-Dependent Hydrolase Of Beta-Lactamase Fold Family
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MEITWFGHAAFKLTDAEGVSVITDPYTPDGVGYPPIRETADAVIISSDDDSAHCRHDLIPGAPPFVNALEIAKNGGKGEV AGLAVAAIEAAEWDHHPEHAVPGQNGMYRFEMDGLKIAHMGDVGNPLTQAQQDFFADTDVLLALAGGYLTIELPDLMEMI HRVQPRLIIPMHFRTLTYKPRNTMWIESFLANFRDDAVDFVCDHTAQITKDDLPDTTRVMVLDYLR
Sequences:
>Translated_226_residues MEITWFGHAAFKLTDAEGVSVITDPYTPDGVGYPPIRETADAVIISSDDDSAHCRHDLIPGAPPFVNALEIAKNGGKGEV AGLAVAAIEAAEWDHHPEHAVPGQNGMYRFEMDGLKIAHMGDVGNPLTQAQQDFFADTDVLLALAGGYLTIELPDLMEMI HRVQPRLIIPMHFRTLTYKPRNTMWIESFLANFRDDAVDFVCDHTAQITKDDLPDTTRVMVLDYLR >Mature_226_residues MEITWFGHAAFKLTDAEGVSVITDPYTPDGVGYPPIRETADAVIISSDDDSAHCRHDLIPGAPPFVNALEIAKNGGKGEV AGLAVAAIEAAEWDHHPEHAVPGQNGMYRFEMDGLKIAHMGDVGNPLTQAQQDFFADTDVLLALAGGYLTIELPDLMEMI HRVQPRLIIPMHFRTLTYKPRNTMWIESFLANFRDDAVDFVCDHTAQITKDDLPDTTRVMVLDYLR
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25016; Mature: 25016
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITWFGHAAFKLTDAEGVSVITDPYTPDGVGYPPIRETADAVIISSDDDSAHCRHDLIP CEEEEEECEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCC GAPPFVNALEIAKNGGKGEVAGLAVAAIEAAEWDHHPEHAVPGQNGMYRFEMDGLKIAHM CCCCHHHHHHHHCCCCCCCHHHHEEEEHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEC GDVGNPLTQAQQDFFADTDVLLALAGGYLTIELPDLMEMIHRVQPRLIIPMHFRTLTYKP CCCCCHHHHHHHHHHCCHHHHEEECCCEEEEECHHHHHHHHHCCCCEEEEEEEEEEEECC RNTMWIESFLANFRDDAVDFVCDHTAQITKDDLPDTTRVMVLDYLR CCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHEEEEEECC >Mature Secondary Structure MEITWFGHAAFKLTDAEGVSVITDPYTPDGVGYPPIRETADAVIISSDDDSAHCRHDLIP CEEEEEECEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCC GAPPFVNALEIAKNGGKGEVAGLAVAAIEAAEWDHHPEHAVPGQNGMYRFEMDGLKIAHM CCCCHHHHHHHHCCCCCCCHHHHEEEEHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEC GDVGNPLTQAQQDFFADTDVLLALAGGYLTIELPDLMEMIHRVQPRLIIPMHFRTLTYKP CCCCCHHHHHHHHHHCCHHHHEEECCCEEEEECHHHHHHHHHCCCCEEEEEEEEEEEECC RNTMWIESFLANFRDDAVDFVCDHTAQITKDDLPDTTRVMVLDYLR CCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA