Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054527
Identifier: 89054527
GI number: 89054527
Start: 2041966
End: 2042508
Strand: Direct
Name: 89054527
Synonym: Jann_2036
Alternate gene names: NA
Gene position: 2041966-2042508 (Clockwise)
Preceding gene: 89054526
Following gene: 89054528
Centisome position: 47.29
GC content: 62.62
Gene sequence:
>543_bases ATGAGCGATGCTACAAGTGAAGCGGCGGGAGAGCCGCTGCCGCTTCGCCTGCTGGATCGGGTGTCGCTGGCGACGAATAT TGTCGGCTCCACCCTGATCTTCGGCCTGATGCTTCTGATCGGCTTCGACGTTGCGGGGCGCAATCTGTTTGGCGCACCCA TCTCGGGCGTGCCGGAGATCGTGTCGCTGTCCATTGTTGCCATCGTTTTTCTACAAGCGCCGCAAACCCTGCGCGCGGGC CGGATGCCGCGTTCTACCGCACTGCTTGATGCCTTGAGCAAGAAGGTTCCGCGTATGGTGACGGTGATGGAGGATCTTTG GGATCTGGTCGGTATGGCGGTGCTTGGCACCATCGTCTGGGCCACCTGGCCGAGGCTGCTGCGCGAGTATGAGCGTGGGA CGTTCGTGGGCGCGGTTGGTGATTTCACCGCCCCGACTTGGCCGATGAAGGCAACAATTGTCGTCGGCGGCGCGCTTTTG GTGCTGCAATTCGCCGGACGGATCTGGCGACGCCACCTTGCGCGGCACGGAGCCCTCGCATGA
Upstream 100 bases:
>100_bases AATTGGATGGCCGGGGTGAGCCCGGGACCGAGATCCTGAGCCTCTACATGGATGCGATGCGCGACGCGGGCGCCACGCCC CTACGCGACTGGGACCGCGA
Downstream 100 bases:
>100_bases CACCGTTTGATATCGGCCTAATCGTTCTGGCCGCGATGCTGGTCCTTGTTTTGCTGGGGATGACCGTCTCCATCGCGCTG ATGGCGTGCTCGTTCGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSDATSEAAGEPLPLRLLDRVSLATNIVGSTLIFGLMLLIGFDVAGRNLFGAPISGVPEIVSLSIVAIVFLQAPQTLRAG RMPRSTALLDALSKKVPRMVTVMEDLWDLVGMAVLGTIVWATWPRLLREYERGTFVGAVGDFTAPTWPMKATIVVGGALL VLQFAGRIWRRHLARHGALA
Sequences:
>Translated_180_residues MSDATSEAAGEPLPLRLLDRVSLATNIVGSTLIFGLMLLIGFDVAGRNLFGAPISGVPEIVSLSIVAIVFLQAPQTLRAG RMPRSTALLDALSKKVPRMVTVMEDLWDLVGMAVLGTIVWATWPRLLREYERGTFVGAVGDFTAPTWPMKATIVVGGALL VLQFAGRIWRRHLARHGALA >Mature_179_residues SDATSEAAGEPLPLRLLDRVSLATNIVGSTLIFGLMLLIGFDVAGRNLFGAPISGVPEIVSLSIVAIVFLQAPQTLRAGR MPRSTALLDALSKKVPRMVTVMEDLWDLVGMAVLGTIVWATWPRLLREYERGTFVGAVGDFTAPTWPMKATIVVGGALLV LQFAGRIWRRHLARHGALA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19388; Mature: 19257
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDATSEAAGEPLPLRLLDRVSLATNIVGSTLIFGLMLLIGFDVAGRNLFGAPISGVPEI CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH VSLSIVAIVFLQAPQTLRAGRMPRSTALLDALSKKVPRMVTVMEDLWDLVGMAVLGTIVW HHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATWPRLLREYERGTFVGAVGDFTAPTWPMKATIVVGGALLVLQFAGRIWRRHLARHGALA HHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDATSEAAGEPLPLRLLDRVSLATNIVGSTLIFGLMLLIGFDVAGRNLFGAPISGVPEI CCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH VSLSIVAIVFLQAPQTLRAGRMPRSTALLDALSKKVPRMVTVMEDLWDLVGMAVLGTIVW HHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATWPRLLREYERGTFVGAVGDFTAPTWPMKATIVVGGALLVLQFAGRIWRRHLARHGALA HHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA