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The map label for this gene is uidR [C]

Identifier: 89054525

GI number: 89054525

Start: 2040215

End: 2040865

Strand: Direct

Name: uidR [C]

Synonym: Jann_2034

Alternate gene names: 89054525

Gene position: 2040215-2040865 (Clockwise)

Preceding gene: 89054524

Following gene: 89054526

Centisome position: 47.25

GC content: 64.36

Gene sequence:

>651_bases
ATGACGTCACACCCAGCAGCTACTTCGCGCCTTAATGCGCGGGACGGAATTCTGGATGCAGCGGAGCGTGCGTTCTCGGA
GCGCGGGTTTGCCGGGGCGAGTATGAAGTCCATTGCGCAGCAGGCCTCTGTAGCGCAGGGGCTGATCCATTATCATTTCA
CCTCCAAAGACGATCTCTACGTCGCTGTGATTGAGCGGCGCGCGGTCTGGATCACGGAGGCCCGCGAAGAGCTGCTAGGC
GCGGTCGACCTGTCCCATCCCGACGCGGTCACCGCCATTTTTGAAGCGTTTTTCCGCCCTCCGTTGGGACCGGAAGGCGG
TGGCCGGGTGTTTGCGCGCATCTTCGCGTTGCTCGCCGTGGGCGATGCCAGGGATCAGGAATTGGTCAAGCGGCTCTACG
ACCCATCAGCGCTGAAGTTCGTGGAGGCGTTGAGCCGCGCGGGGCAGGGGGCGTCGCGGGAGGATGCGTCCTGGGGCTAC
TCCATGGCGCTTGGATTGCTTGTCGGCTCCGTGGGCCGCAATGGCAGGGCGGAGCGGTTGGCGGGATCACCCCAACCGCC
CTCGGAGGATGCAGAGGATCTGATCACACGGCTGAGCGTCCACGCCACTGGCGGGTTCCGCGCGCTGTGCGCCATGACGG
ACGACGAATAA

Upstream 100 bases:

>100_bases
GCCGTGAATGGTACGCGAGAGCAGCCACGGGACAAGTCTCCCCGATCACGTCTTAACTCAGGCTCTTGACTGATCGATCA
GTCAGTGACCATAATTCTTA

Downstream 100 bases:

>100_bases
AGTAACGGGCCCCGGGAGGGGGCGACTTTACCCAAGGGAGGAATGGGAATGCGAGGATTTTACGGAGTGATGGCCGCCGC
CATCGCGATCACGCCGATGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Transcriptional Regulator; Regulatory Protein Tetr; TetR Family Regulatory Protein; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator TetR; Transcliptional Regulator TetR Family

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTSHPAATSRLNARDGILDAAERAFSERGFAGASMKSIAQQASVAQGLIHYHFTSKDDLYVAVIERRAVWITEAREELLG
AVDLSHPDAVTAIFEAFFRPPLGPEGGGRVFARIFALLAVGDARDQELVKRLYDPSALKFVEALSRAGQGASREDASWGY
SMALGLLVGSVGRNGRAERLAGSPQPPSEDAEDLITRLSVHATGGFRALCAMTDDE

Sequences:

>Translated_216_residues
MTSHPAATSRLNARDGILDAAERAFSERGFAGASMKSIAQQASVAQGLIHYHFTSKDDLYVAVIERRAVWITEAREELLG
AVDLSHPDAVTAIFEAFFRPPLGPEGGGRVFARIFALLAVGDARDQELVKRLYDPSALKFVEALSRAGQGASREDASWGY
SMALGLLVGSVGRNGRAERLAGSPQPPSEDAEDLITRLSVHATGGFRALCAMTDDE
>Mature_215_residues
TSHPAATSRLNARDGILDAAERAFSERGFAGASMKSIAQQASVAQGLIHYHFTSKDDLYVAVIERRAVWITEAREELLGA
VDLSHPDAVTAIFEAFFRPPLGPEGGGRVFARIFALLAVGDARDQELVKRLYDPSALKFVEALSRAGQGASREDASWGYS
MALGLLVGSVGRNGRAERLAGSPQPPSEDAEDLITRLSVHATGGFRALCAMTDDE

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23145; Mature: 23014

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSHPAATSRLNARDGILDAAERAFSERGFAGASMKSIAQQASVAQGLIHYHFTSKDDLY
CCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEE
VAVIERRAVWITEAREELLGAVDLSHPDAVTAIFEAFFRPPLGPEGGGRVFARIFALLAV
EEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
GDARDQELVKRLYDPSALKFVEALSRAGQGASREDASWGYSMALGLLVGSVGRNGRAERL
CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHC
AGSPQPPSEDAEDLITRLSVHATGGFRALCAMTDDE
CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCC
>Mature Secondary Structure 
TSHPAATSRLNARDGILDAAERAFSERGFAGASMKSIAQQASVAQGLIHYHFTSKDDLY
CCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEE
VAVIERRAVWITEAREELLGAVDLSHPDAVTAIFEAFFRPPLGPEGGGRVFARIFALLAV
EEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
GDARDQELVKRLYDPSALKFVEALSRAGQGASREDASWGYSMALGLLVGSVGRNGRAERL
CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHC
AGSPQPPSEDAEDLITRLSVHATGGFRALCAMTDDE
CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA