Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054517
Identifier: 89054517
GI number: 89054517
Start: 2031829
End: 2032293
Strand: Direct
Name: 89054517
Synonym: Jann_2026
Alternate gene names: NA
Gene position: 2031829-2032293 (Clockwise)
Preceding gene: 89054516
Following gene: 89054518
Centisome position: 47.06
GC content: 66.24
Gene sequence:
>465_bases GTGCCGTGCCTTCTGGCGCTGGTCCTCTGTCACATTGCCCCTGCCGCCGCGCAATCGCCGGACCAGTCCACCGTGTTCGG CGATTGGGAGCGGGTTTGCTCCACCGATGGGGCCTGCGTGTTCTCGCAGGCCAACGCCGATGCAGACACCAACGACATCC GCATGCGCACCGAGATTTCCCGGGTGTCGGACACGCAGATCCTGATGTCGGTCGTGGTGCCCGACAGCGTGCTGCTGACC GAGGGGCCGTGGTTGACCATCGATGGCATCTACGTGGGTGAGTTGAACTACGTCCAATGCCCCGGCGGATGCCTGGCCCG CATCCTGTTCACCGACCAGCAGTTCCGGCTTGTGTCCGGCGGCACGCGCGGCGTCATCACGGTGACGGCTGGCGGCCAAC GCGTGGGGCTTGTCGTCTCCATGGACGGGCTGCAGGACGGCCTCGCGTCGCTCGACGATCTGTGA
Upstream 100 bases:
>100_bases GACCGGGTCTTTGTGAACACCGGCGTGTCGGCGGCCACCAATGGCGTGGGTGGCACGGCGGCGCGGTTGGGCGTGACCTT TGGTCAGTAGGCCTGCATGG
Downstream 100 bases:
>100_bases CCACAGGTCCCGCTAACGCACTACGTCGAGGCGGACAATCGGGCTGAACGGCGCGCCTGCCTGCTGTCGGATGTCATTTT GGCGCGGACGTCAATTTGGA
Product: invasion associated locus B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPCLLALVLCHIAPAAAQSPDQSTVFGDWERVCSTDGACVFSQANADADTNDIRMRTEISRVSDTQILMSVVVPDSVLLT EGPWLTIDGIYVGELNYVQCPGGCLARILFTDQQFRLVSGGTRGVITVTAGGQRVGLVVSMDGLQDGLASLDDL
Sequences:
>Translated_154_residues MPCLLALVLCHIAPAAAQSPDQSTVFGDWERVCSTDGACVFSQANADADTNDIRMRTEISRVSDTQILMSVVVPDSVLLT EGPWLTIDGIYVGELNYVQCPGGCLARILFTDQQFRLVSGGTRGVITVTAGGQRVGLVVSMDGLQDGLASLDDL >Mature_153_residues PCLLALVLCHIAPAAAQSPDQSTVFGDWERVCSTDGACVFSQANADADTNDIRMRTEISRVSDTQILMSVVVPDSVLLTE GPWLTIDGIYVGELNYVQCPGGCLARILFTDQQFRLVSGGTRGVITVTAGGQRVGLVVSMDGLQDGLASLDDL
Specific function: Unknown
COG id: COG5342
COG function: function code R; Invasion protein B, involved in pathogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16335; Mature: 16204
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCLLALVLCHIAPAAAQSPDQSTVFGDWERVCSTDGACVFSQANADADTNDIRMRTEIS CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEHHH RVSDTQILMSVVVPDSVLLTEGPWLTIDGIYVGELNYVQCPGGCLARILFTDQQFRLVSG HCCHHHEEEEECCCCEEEEECCCEEEECCEEECCCCEEECCHHHEEEEEECCCEEEEEEC GTRGVITVTAGGQRVGLVVSMDGLQDGLASLDDL CCCEEEEEECCCCEEEEEEEECCHHHHHHHHCCC >Mature Secondary Structure PCLLALVLCHIAPAAAQSPDQSTVFGDWERVCSTDGACVFSQANADADTNDIRMRTEIS HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEHHH RVSDTQILMSVVVPDSVLLTEGPWLTIDGIYVGELNYVQCPGGCLARILFTDQQFRLVSG HCCHHHEEEEECCCCEEEEECCCEEEECCEEECCCCEEECCHHHEEEEEECCCEEEEEEC GTRGVITVTAGGQRVGLVVSMDGLQDGLASLDDL CCCEEEEEECCCCEEEEEEEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA