Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054517

Identifier: 89054517

GI number: 89054517

Start: 2031829

End: 2032293

Strand: Direct

Name: 89054517

Synonym: Jann_2026

Alternate gene names: NA

Gene position: 2031829-2032293 (Clockwise)

Preceding gene: 89054516

Following gene: 89054518

Centisome position: 47.06

GC content: 66.24

Gene sequence:

>465_bases
GTGCCGTGCCTTCTGGCGCTGGTCCTCTGTCACATTGCCCCTGCCGCCGCGCAATCGCCGGACCAGTCCACCGTGTTCGG
CGATTGGGAGCGGGTTTGCTCCACCGATGGGGCCTGCGTGTTCTCGCAGGCCAACGCCGATGCAGACACCAACGACATCC
GCATGCGCACCGAGATTTCCCGGGTGTCGGACACGCAGATCCTGATGTCGGTCGTGGTGCCCGACAGCGTGCTGCTGACC
GAGGGGCCGTGGTTGACCATCGATGGCATCTACGTGGGTGAGTTGAACTACGTCCAATGCCCCGGCGGATGCCTGGCCCG
CATCCTGTTCACCGACCAGCAGTTCCGGCTTGTGTCCGGCGGCACGCGCGGCGTCATCACGGTGACGGCTGGCGGCCAAC
GCGTGGGGCTTGTCGTCTCCATGGACGGGCTGCAGGACGGCCTCGCGTCGCTCGACGATCTGTGA

Upstream 100 bases:

>100_bases
GACCGGGTCTTTGTGAACACCGGCGTGTCGGCGGCCACCAATGGCGTGGGTGGCACGGCGGCGCGGTTGGGCGTGACCTT
TGGTCAGTAGGCCTGCATGG

Downstream 100 bases:

>100_bases
CCACAGGTCCCGCTAACGCACTACGTCGAGGCGGACAATCGGGCTGAACGGCGCGCCTGCCTGCTGTCGGATGTCATTTT
GGCGCGGACGTCAATTTGGA

Product: invasion associated locus B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPCLLALVLCHIAPAAAQSPDQSTVFGDWERVCSTDGACVFSQANADADTNDIRMRTEISRVSDTQILMSVVVPDSVLLT
EGPWLTIDGIYVGELNYVQCPGGCLARILFTDQQFRLVSGGTRGVITVTAGGQRVGLVVSMDGLQDGLASLDDL

Sequences:

>Translated_154_residues
MPCLLALVLCHIAPAAAQSPDQSTVFGDWERVCSTDGACVFSQANADADTNDIRMRTEISRVSDTQILMSVVVPDSVLLT
EGPWLTIDGIYVGELNYVQCPGGCLARILFTDQQFRLVSGGTRGVITVTAGGQRVGLVVSMDGLQDGLASLDDL
>Mature_153_residues
PCLLALVLCHIAPAAAQSPDQSTVFGDWERVCSTDGACVFSQANADADTNDIRMRTEISRVSDTQILMSVVVPDSVLLTE
GPWLTIDGIYVGELNYVQCPGGCLARILFTDQQFRLVSGGTRGVITVTAGGQRVGLVVSMDGLQDGLASLDDL

Specific function: Unknown

COG id: COG5342

COG function: function code R; Invasion protein B, involved in pathogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16335; Mature: 16204

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCLLALVLCHIAPAAAQSPDQSTVFGDWERVCSTDGACVFSQANADADTNDIRMRTEIS
CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEHHH
RVSDTQILMSVVVPDSVLLTEGPWLTIDGIYVGELNYVQCPGGCLARILFTDQQFRLVSG
HCCHHHEEEEECCCCEEEEECCCEEEECCEEECCCCEEECCHHHEEEEEECCCEEEEEEC
GTRGVITVTAGGQRVGLVVSMDGLQDGLASLDDL
CCCEEEEEECCCCEEEEEEEECCHHHHHHHHCCC
>Mature Secondary Structure 
PCLLALVLCHIAPAAAQSPDQSTVFGDWERVCSTDGACVFSQANADADTNDIRMRTEIS
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEHHH
RVSDTQILMSVVVPDSVLLTEGPWLTIDGIYVGELNYVQCPGGCLARILFTDQQFRLVSG
HCCHHHEEEEECCCCEEEEECCCEEEECCEEECCCCEEECCHHHEEEEEECCCEEEEEEC
GTRGVITVTAGGQRVGLVVSMDGLQDGLASLDDL
CCCEEEEEECCCCEEEEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA