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The map label for this gene is 89054494

Identifier: 89054494

GI number: 89054494

Start: 2005022

End: 2007007

Strand: Reverse

Name: 89054494

Synonym: Jann_2003

Alternate gene names: NA

Gene position: 2007007-2005022 (Counterclockwise)

Preceding gene: 89054496

Following gene: 89054490

Centisome position: 46.48

GC content: 61.68

Gene sequence:

>1986_bases
ATGAACCAGCCCGCCGATATACATCCCAAGCCAGAACCCGCCACCTCGCCCGCGCCCCCGGTGTCGCCGCCCGCCGATAT
TCCGTTCCCCTTCGCAACACTCGTCGAGAACCAGCGCAGCCGAGCTCACAATGCCACGCGCCGCGCCCAGGGCATCTTTG
CCGCACTAATCGCCGTTATCCTACTAGGTATCGGGTACTACGTAGGCCTGCCGTTGTACCTCCAATGGAACGAGTCGTCA
CGCAGCGTCTACGAAGCTGAGGCGGGTACGCTGTCCTCGCAGTTGGACCGGATGGATGAGGCAAGGGACCGCATATGGAC
AGCTCTGTCCGAAGAGCTGAAGGGAATCGGAACTCCTCGCCCCTCTGGCGTCGACGTAAACCTGAATGACGTCCGTAGTC
TGCCCGACGGTACTATCTTGGTCGCCGTGGGGCGGCACGGCACCGTCATACGGTCCACCGATGCCGGCAACACTTGGACA
CCTCGTCGCTCCGGCGTGGATATTGATCTATTCAACCTCCGTGTTCTGCCCGACAGCACCACCCTGGTCGCTGTGGGAGA
GGGCGGCACCGTCATACGGTCCACTGATGCTGGCAACACTTGGCAGTCCCGCCCTTCCGGCGTCAATAACAGTCTGTACG
ACTTACGCGTGCTACCCAACAGCACCACCCTAATCGCTGTTGGACGAAGCGGTGCAGTCATACGGTCCACTGATGCTGGC
AACACTTGGATGCCCCGCCCCTCCGGCGTGGATGTTGATCTATACAACCTTGGCATTCTGGCGGACGGCGCCACCTTGGT
CGCTGTAGGCGAAGACGGCACTGTCATACGCTCGACCGATGCCGGCGAAACTTGGACATTCCTTCCCTCCGTCGTGGATG
CCGATCTGTTCAACCTCGGCATTCTGCCCGACAGCACCACCTTAGTCGGGGTAGGAGAGAGCGGCACCGTCATAAGGTCT
ACCGATACCGATAGCACCTGGATGCCCCGCCCCTCCGGCGTCATTGCGGATTTGTATGTCCCTCGCGTGCTGCCCGACGG
CGTTACTCTGATCGCGGTGGGATCAAGTGGCGGAATCATACGCTCGACCGATGCCGGCATGACATGGACGCCCCGCCCCT
CCGGCATCGATGGGAATCTGTTCAACTTCAGCGTTTTGCCCGACAGCGGCATCCTGGTGGCGGTAGGGTCAGATGGCGCA
GTCATACGCTCGACCGATGCCGGCGTGACATGGACGCCCCGCCCTTCCGGGCAAGATATTACCCTAAGAGATATCCGCGT
TCTACCCGATGGTACGACACTGATTGCGATAGGTTTTTTTGGCGCGATTGTGATTATCGACGACCGTTACGCCGATGCCC
TCGCCGCGATCGGACCTCTCTCCGGCTCCCTCGGCGATAATGCCTACCGCAGCGGCATTGCCGGGCTCCCGGAGTATGTT
CGCAACCACCCCGTCGTTGGGGCCTTACTCGCCGAACTGGACGGCACCATCGAAGGTCGTGCCGACCTCGAAACCCGCCT
TCAATCCGCCCGCGCCTCCGCCGACGAAATCAGGACAGGCGGCTTTTCTCTCGCTCAACGGCGCCAGGATTTCGAGGAGT
TCATGCGCGTATGTACAGCCGACCTGTCAGACGAGGCAGAGGGCGTGGGCACCGAACACTGCACCCGCGCCTATGTCGAC
CTTCGCCAAGCCGAAAGCCAGACGGTGTGGGAGATCCTTGCCGAACGGGCGCCGCAGGCCATCTTGCTGTTGTTCCTCCT
CGCAACGCTTGCGGCACTTTATCGGTACAACATGCGCCTTGCGGGTTTCCACGCCGCGCGAGCCGACGCGCTGCATCTCT
ACGCCATGGGCCGCACCCACGACCCCGCCATTCTGACGGAGTTCTCGGACGCACTAGCCGCCGATAAGGTCGAGTTCGGC
AAGGGGAACACACCGTCGGAGCAGGCTGTCGAGATCGCAAAGGCTATGGTCGGGCGGCGTGGGTAA

Upstream 100 bases:

>100_bases
TAGATTTGCGACCTACCAGACAGAGCAATCTAGATTTGAGCGACCAATCGTATCATAGTTTTCAATCCCATTGTGCCGGC
TACGTGATACGGAGGAGATT

Downstream 100 bases:

>100_bases
GGCCTGTTAGACAGTGGCCATTCCCGTTGTGCCGCTGGAACCTTTCGACCGTTACAATAGCTCCTTTGCGCCTCTTTGAG
CGCCCCTGCTGGCAGGTCTA

Product: glycosyl hydrolase, BNR protein

Products: NA

Alternate protein names: BNR/Asp-Box Repeat-Containing Protein; Glycosyl Hydrolase; Glycosyl Hydrolase BNR Repeat; BNR/Asp-Box Repeat Domain Protein; BNR Domain-Containing Protein; BNR/Asp-Box Repeat Protein; BNR Repeat-Containing Protein; Plant Photosystem II Stability/Assembly Factor Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase BNR Protein; Glycosyl Hydrolase BNR Repeat Protein; Oxidoreductase; Two Component Regulator Propeller Domain-Containing Protein; Photosystem II Stability/Assembly Factor-Like Protein; Cell Wall/Surface Repeat Protein

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MNQPADIHPKPEPATSPAPPVSPPADIPFPFATLVENQRSRAHNATRRAQGIFAALIAVILLGIGYYVGLPLYLQWNESS
RSVYEAEAGTLSSQLDRMDEARDRIWTALSEELKGIGTPRPSGVDVNLNDVRSLPDGTILVAVGRHGTVIRSTDAGNTWT
PRRSGVDIDLFNLRVLPDSTTLVAVGEGGTVIRSTDAGNTWQSRPSGVNNSLYDLRVLPNSTTLIAVGRSGAVIRSTDAG
NTWMPRPSGVDVDLYNLGILADGATLVAVGEDGTVIRSTDAGETWTFLPSVVDADLFNLGILPDSTTLVGVGESGTVIRS
TDTDSTWMPRPSGVIADLYVPRVLPDGVTLIAVGSSGGIIRSTDAGMTWTPRPSGIDGNLFNFSVLPDSGILVAVGSDGA
VIRSTDAGVTWTPRPSGQDITLRDIRVLPDGTTLIAIGFFGAIVIIDDRYADALAAIGPLSGSLGDNAYRSGIAGLPEYV
RNHPVVGALLAELDGTIEGRADLETRLQSARASADEIRTGGFSLAQRRQDFEEFMRVCTADLSDEAEGVGTEHCTRAYVD
LRQAESQTVWEILAERAPQAILLLFLLATLAALYRYNMRLAGFHAARADALHLYAMGRTHDPAILTEFSDALAADKVEFG
KGNTPSEQAVEIAKAMVGRRG

Sequences:

>Translated_661_residues
MNQPADIHPKPEPATSPAPPVSPPADIPFPFATLVENQRSRAHNATRRAQGIFAALIAVILLGIGYYVGLPLYLQWNESS
RSVYEAEAGTLSSQLDRMDEARDRIWTALSEELKGIGTPRPSGVDVNLNDVRSLPDGTILVAVGRHGTVIRSTDAGNTWT
PRRSGVDIDLFNLRVLPDSTTLVAVGEGGTVIRSTDAGNTWQSRPSGVNNSLYDLRVLPNSTTLIAVGRSGAVIRSTDAG
NTWMPRPSGVDVDLYNLGILADGATLVAVGEDGTVIRSTDAGETWTFLPSVVDADLFNLGILPDSTTLVGVGESGTVIRS
TDTDSTWMPRPSGVIADLYVPRVLPDGVTLIAVGSSGGIIRSTDAGMTWTPRPSGIDGNLFNFSVLPDSGILVAVGSDGA
VIRSTDAGVTWTPRPSGQDITLRDIRVLPDGTTLIAIGFFGAIVIIDDRYADALAAIGPLSGSLGDNAYRSGIAGLPEYV
RNHPVVGALLAELDGTIEGRADLETRLQSARASADEIRTGGFSLAQRRQDFEEFMRVCTADLSDEAEGVGTEHCTRAYVD
LRQAESQTVWEILAERAPQAILLLFLLATLAALYRYNMRLAGFHAARADALHLYAMGRTHDPAILTEFSDALAADKVEFG
KGNTPSEQAVEIAKAMVGRRG
>Mature_661_residues
MNQPADIHPKPEPATSPAPPVSPPADIPFPFATLVENQRSRAHNATRRAQGIFAALIAVILLGIGYYVGLPLYLQWNESS
RSVYEAEAGTLSSQLDRMDEARDRIWTALSEELKGIGTPRPSGVDVNLNDVRSLPDGTILVAVGRHGTVIRSTDAGNTWT
PRRSGVDIDLFNLRVLPDSTTLVAVGEGGTVIRSTDAGNTWQSRPSGVNNSLYDLRVLPNSTTLIAVGRSGAVIRSTDAG
NTWMPRPSGVDVDLYNLGILADGATLVAVGEDGTVIRSTDAGETWTFLPSVVDADLFNLGILPDSTTLVGVGESGTVIRS
TDTDSTWMPRPSGVIADLYVPRVLPDGVTLIAVGSSGGIIRSTDAGMTWTPRPSGIDGNLFNFSVLPDSGILVAVGSDGA
VIRSTDAGVTWTPRPSGQDITLRDIRVLPDGTTLIAIGFFGAIVIIDDRYADALAAIGPLSGSLGDNAYRSGIAGLPEYV
RNHPVVGALLAELDGTIEGRADLETRLQSARASADEIRTGGFSLAQRRQDFEEFMRVCTADLSDEAEGVGTEHCTRAYVD
LRQAESQTVWEILAERAPQAILLLFLLATLAALYRYNMRLAGFHAARADALHLYAMGRTHDPAILTEFSDALAADKVEFG
KGNTPSEQAVEIAKAMVGRRG

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70307; Mature: 70307

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPADIHPKPEPATSPAPPVSPPADIPFPFATLVENQRSRAHNATRRAQGIFAALIAVI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGIGYYVGLPLYLQWNESSRSVYEAEAGTLSSQLDRMDEARDRIWTALSEELKGIGTPR
HHHHHHHHCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSGVDVNLNDVRSLPDGTILVAVGRHGTVIRSTDAGNTWTPRRSGVDIDLFNLRVLPDST
CCCEEEEHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCC
TLVAVGEGGTVIRSTDAGNTWQSRPSGVNNSLYDLRVLPNSTTLIAVGRSGAVIRSTDAG
EEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEECCCC
NTWMPRPSGVDVDLYNLGILADGATLVAVGEDGTVIRSTDAGETWTFLPSVVDADLFNLG
CCCCCCCCCCEEEEEEEEEEECCEEEEEECCCCCEEEECCCCCCEEECHHHHCCHHHEEE
ILPDSTTLVGVGESGTVIRSTDTDSTWMPRPSGVIADLYVPRVLPDGVTLIAVGSSGGII
CCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEE
RSTDAGMTWTPRPSGIDGNLFNFSVLPDSGILVAVGSDGAVIRSTDAGVTWTPRPSGQDI
EECCCCCEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCEEECCCCCCCEE
TLRDIRVLPDGTTLIAIGFFGAIVIIDDRYADALAAIGPLSGSLGDNAYRSGIAGLPEYV
EEEEEEECCCCCEEEEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHH
RNHPVVGALLAELDGTIEGRADLETRLQSARASADEIRTGGFSLAQRRQDFEEFMRVCTA
HCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHC
DLSDEAEGVGTEHCTRAYVDLRQAESQTVWEILAERAPQAILLLFLLATLAALYRYNMRL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEE
AGFHAARADALHLYAMGRTHDPAILTEFSDALAADKVEFGKGNTPSEQAVEIAKAMVGRR
EECCHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHCCC
G
C
>Mature Secondary Structure
MNQPADIHPKPEPATSPAPPVSPPADIPFPFATLVENQRSRAHNATRRAQGIFAALIAVI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGIGYYVGLPLYLQWNESSRSVYEAEAGTLSSQLDRMDEARDRIWTALSEELKGIGTPR
HHHHHHHHCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSGVDVNLNDVRSLPDGTILVAVGRHGTVIRSTDAGNTWTPRRSGVDIDLFNLRVLPDST
CCCEEEEHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCC
TLVAVGEGGTVIRSTDAGNTWQSRPSGVNNSLYDLRVLPNSTTLIAVGRSGAVIRSTDAG
EEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEECCCC
NTWMPRPSGVDVDLYNLGILADGATLVAVGEDGTVIRSTDAGETWTFLPSVVDADLFNLG
CCCCCCCCCCEEEEEEEEEEECCEEEEEECCCCCEEEECCCCCCEEECHHHHCCHHHEEE
ILPDSTTLVGVGESGTVIRSTDTDSTWMPRPSGVIADLYVPRVLPDGVTLIAVGSSGGII
CCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEE
RSTDAGMTWTPRPSGIDGNLFNFSVLPDSGILVAVGSDGAVIRSTDAGVTWTPRPSGQDI
EECCCCCEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCEEECCCCCCCEE
TLRDIRVLPDGTTLIAIGFFGAIVIIDDRYADALAAIGPLSGSLGDNAYRSGIAGLPEYV
EEEEEEECCCCCEEEEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHH
RNHPVVGALLAELDGTIEGRADLETRLQSARASADEIRTGGFSLAQRRQDFEEFMRVCTA
HCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHC
DLSDEAEGVGTEHCTRAYVDLRQAESQTVWEILAERAPQAILLLFLLATLAALYRYNMRL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEE
AGFHAARADALHLYAMGRTHDPAILTEFSDALAADKVEFGKGNTPSEQAVEIAKAMVGRR
EECCHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA