Click here to switch to the map view.

The map label for this gene is yrhP [H]

Identifier: 89054493

GI number: 89054493

Start: 2004008

End: 2004634

Strand: Direct

Name: yrhP [H]

Synonym: Jann_2002

Alternate gene names: 89054493

Gene position: 2004008-2004634 (Clockwise)

Preceding gene: 89054492

Following gene: 89054495

Centisome position: 46.41

GC content: 53.27

Gene sequence:

>627_bases
ATGATCGACCCTACCGTCTTACTCACCTACTCGTTGATCGTTCTAGGCTTTGTTTTTATCCCCGGTCCCGCGACGCTATT
GACCGTCGCACGGGCTACCACTTCAGGGACAAAAGTTGGCATCGCTACTGGCGCGGGCATTACAGCTGGCGACTTCCTCC
ACACTATTATGGCAGTTGTCGGGATCTCCGCGATCATAGCTGCATCCGCGACGTTGTTCACCATCGTGAAGTATCTCGGC
GCGGCCTATCTCGTATATCTTGGTCTGAAGGCATTTTTCGAGAAAACCTCCGTCGATCTGGGTCAAGGGCGTGTTCCAAT
CTCTGCGCCTCAAGCGTTCAGACAGGCGATATTGGCGGAAGTTCTTAACCCTAAGACGGCACTCTTCTTTCTCGCGTTTC
TTCCGCAGTTCGTTGCGCCCGAGAAGGGTTTCGTCGTTATCCAGCTGACCACTCTCGGCGTAGTCTTTGCATTGATAGGG
TTCTTCAGCACAATCTTGTTTGCTGTCGCGGCTGGTGGCCTCGGAAACTTCCTTCGTCGCAATCCAGCAGTTCTAAAATG
GCAGGGTAAGGTTGTTGGGAGTATCTACTGCGCTCTGGGCGTTCGACTGGCACTGCAAGAACGGTAA

Upstream 100 bases:

>100_bases
CGCTAGTTAGTCAGGCTGCAGCGAACGTCTGGTTCTTGAGCTTGTCATTTGTCGCCTTCTATGGATTGCTGCAAGTCCGC
GAATTTATGGAGAAAATAGA

Downstream 100 bases:

>100_bases
GCAGACATCCGCACAACGGCAGCTTTATCCCGCGTTGCAGCCATCCGGTCAGTCTAAAATGCTGCGACCTGTACGAACGG
CAGCTTTCGGGAAGAAGGCC

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MIDPTVLLTYSLIVLGFVFIPGPATLLTVARATTSGTKVGIATGAGITAGDFLHTIMAVVGISAIIAASATLFTIVKYLG
AAYLVYLGLKAFFEKTSVDLGQGRVPISAPQAFRQAILAEVLNPKTALFFLAFLPQFVAPEKGFVVIQLTTLGVVFALIG
FFSTILFAVAAGGLGNFLRRNPAVLKWQGKVVGSIYCALGVRLALQER

Sequences:

>Translated_208_residues
MIDPTVLLTYSLIVLGFVFIPGPATLLTVARATTSGTKVGIATGAGITAGDFLHTIMAVVGISAIIAASATLFTIVKYLG
AAYLVYLGLKAFFEKTSVDLGQGRVPISAPQAFRQAILAEVLNPKTALFFLAFLPQFVAPEKGFVVIQLTTLGVVFALIG
FFSTILFAVAAGGLGNFLRRNPAVLKWQGKVVGSIYCALGVRLALQER
>Mature_208_residues
MIDPTVLLTYSLIVLGFVFIPGPATLLTVARATTSGTKVGIATGAGITAGDFLHTIMAVVGISAIIAASATLFTIVKYLG
AAYLVYLGLKAFFEKTSVDLGQGRVPISAPQAFRQAILAEVLNPKTALFFLAFLPQFVAPEKGFVVIQLTTLGVVFALIG
FFSTILFAVAAGGLGNFLRRNPAVLKWQGKVVGSIYCALGVRLALQER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=207, Percent_Identity=28.5024154589372, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI48994979, Length=184, Percent_Identity=27.1739130434783, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1786522, Length=135, Percent_Identity=29.6296296296296, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21882; Mature: 21882

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPTVLLTYSLIVLGFVFIPGPATLLTVARATTSGTKVGIATGAGITAGDFLHTIMAVV
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH
GISAIIAASATLFTIVKYLGAAYLVYLGLKAFFEKTSVDLGQGRVPISAPQAFRQAILAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
VLNPKTALFFLAFLPQFVAPEKGFVVIQLTTLGVVFALIGFFSTILFAVAAGGLGNFLRR
HHCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
NPAVLKWQGKVVGSIYCALGVRLALQER
CCCEEEECCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDPTVLLTYSLIVLGFVFIPGPATLLTVARATTSGTKVGIATGAGITAGDFLHTIMAVV
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH
GISAIIAASATLFTIVKYLGAAYLVYLGLKAFFEKTSVDLGQGRVPISAPQAFRQAILAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
VLNPKTALFFLAFLPQFVAPEKGFVVIQLTTLGVVFALIGFFSTILFAVAAGGLGNFLRR
HHCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
NPAVLKWQGKVVGSIYCALGVRLALQER
CCCEEEECCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]