Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is guaB [H]
Identifier: 89054473
GI number: 89054473
Start: 1977804
End: 1979252
Strand: Direct
Name: guaB [H]
Synonym: Jann_1982
Alternate gene names: 89054473
Gene position: 1977804-1979252 (Clockwise)
Preceding gene: 89054472
Following gene: 89054474
Centisome position: 45.8
GC content: 64.39
Gene sequence:
>1449_bases ATGGAGATTCGCGAGGCCCTCACCTTTGATGACGTTCTGCTGGTTCCCGGCAAATCCTCGGTGCTGCCGTCGGACGCCGA CACGCGGACGCGGGTGACCAAGAGCATCGCGTTGAATATTCCGCTGCTCAGCTCGGCCATGGACACGGTGACGGAGGGGC GCATGGCGATTGCCATGGCGCAGGCGGGCGGGATGGGGGTGATCCACCGCAATCTGGATGTGGACCAACAGGCGCGCGAA GTGCGGCGGGTAAAGCGGTTCGAGAGCGGGATTGTGTACAACCCCGTGACGTTGACCCCGGACCAGACGCTGGCGGATGC GAAGTCGCTGATGGAACGCTACGGATTTTCGGGCTTTCCCGTCGTGGACGAGACGCGCCGCGTGTTGGGCATTGTCACCA ATCGCGACATGCGGTTCGCGGCCGATGACGCAACGCCGGTGCAGGCGATGATGACGGCCGATGACCTGGCGATCCTGCGC GAGCCTGCCGACCGGGACGAGGCGATCAGCCTGATGAAGGCGCGTCGGATCGAAAAGCTGCTGATCACCGACGGGCAGGG CGCGTTGACGGGACTTTTGACGTTGAAAGACACGGAGCAGGCGGTGCTGAACCCGATGGCCTGCAAGGACCCGCTGGGGC GGTTGCGGGTGGCGGCTGCCACGACCGTGGGCGATGCGGGCTTTGAGCGGTCTCAGGCACTGATCGACGCGGGCTGTGAC CTGATCGTCATCGACACGGCCCATGGCCATTCGGAGGGCGTGGCGACAGCGGTCGAGCGGGTGAAATCCCTGTCCAATGA GGTGCAAGTCGTCGCGGGCAATGTCGCGACCGGAGAGGCCACGCGCGCGTTGATCGACGCTGGTGCTGACGCGGTGAAAG TGGGGATCGGACCGGGCTCCATCTGCACGACGCGTATCGTGGCAGGCGTGGGCGTGCCGCAGCTGACGGCGATTTCCGAT TGTGCGGACGCCGCGGGCGACACGCCGGTTATCGCGGATGGCGGCATCAAATTTTCAGGCGACTTCGCCAAGGCGATTGC TGCGGGCGCCCATTGCGCCATGGTCGGGTCGATGATTGCCGGAACGGACGAGTCGCCCGGCGAGGTGATCCTCTACCAGG GCCGTTCGTTCAAATCCTATCGTGGCATGGGGTCCCTTGGGGCCATGGCGCGCGGATCGGCGGATCGGTATTTCCAGAAG GACGCGGCCAGCGACAAACTGGTGCCCGAAGGGATCGAGGGGCAGGTGCCTTACAAAGGCTCGGCAGGGGCCGTCGTGCA TCAGTTGATCGGGGGCCTGCGCGCCGCCATGGGCTACACCGGCAGTGCAACGGTCGACGAGATGCGGACGAAATGCCAGT TCGTGCGGATCACCGGATCGGGTCTGAAAGAAAGCCATGTGCATGATGTGCAGATCACTCGCGAAAGCCCAAATTATCGT GCGGGATGA
Upstream 100 bases:
>100_bases TCGGGACGAGGCCTGAGGCACACCAGATTTAGGGCTTGCCCCGCTGGCGTCCCCATGGGATAGCGACGTGCCAACCGATC CCCCTCCAAGGAGCACCCAG
Downstream 100 bases:
>100_bases ATATCTTGTACGCCGACATTAAAGTGATACCTTAGGATGCAACCTGCCGCGCGCTATGCCGCCGCAATCGAGGTATTGGA CGCTTGGTGCGATGGCTTGG
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MEIREALTFDDVLLVPGKSSVLPSDADTRTRVTKSIALNIPLLSSAMDTVTEGRMAIAMAQAGGMGVIHRNLDVDQQARE VRRVKRFESGIVYNPVTLTPDQTLADAKSLMERYGFSGFPVVDETRRVLGIVTNRDMRFAADDATPVQAMMTADDLAILR EPADRDEAISLMKARRIEKLLITDGQGALTGLLTLKDTEQAVLNPMACKDPLGRLRVAAATTVGDAGFERSQALIDAGCD LIVIDTAHGHSEGVATAVERVKSLSNEVQVVAGNVATGEATRALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAISD CADAAGDTPVIADGGIKFSGDFAKAIAAGAHCAMVGSMIAGTDESPGEVILYQGRSFKSYRGMGSLGAMARGSADRYFQK DAASDKLVPEGIEGQVPYKGSAGAVVHQLIGGLRAAMGYTGSATVDEMRTKCQFVRITGSGLKESHVHDVQITRESPNYR AG
Sequences:
>Translated_482_residues MEIREALTFDDVLLVPGKSSVLPSDADTRTRVTKSIALNIPLLSSAMDTVTEGRMAIAMAQAGGMGVIHRNLDVDQQARE VRRVKRFESGIVYNPVTLTPDQTLADAKSLMERYGFSGFPVVDETRRVLGIVTNRDMRFAADDATPVQAMMTADDLAILR EPADRDEAISLMKARRIEKLLITDGQGALTGLLTLKDTEQAVLNPMACKDPLGRLRVAAATTVGDAGFERSQALIDAGCD LIVIDTAHGHSEGVATAVERVKSLSNEVQVVAGNVATGEATRALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAISD CADAAGDTPVIADGGIKFSGDFAKAIAAGAHCAMVGSMIAGTDESPGEVILYQGRSFKSYRGMGSLGAMARGSADRYFQK DAASDKLVPEGIEGQVPYKGSAGAVVHQLIGGLRAAMGYTGSATVDEMRTKCQFVRITGSGLKESHVHDVQITRESPNYR AG >Mature_482_residues MEIREALTFDDVLLVPGKSSVLPSDADTRTRVTKSIALNIPLLSSAMDTVTEGRMAIAMAQAGGMGVIHRNLDVDQQARE VRRVKRFESGIVYNPVTLTPDQTLADAKSLMERYGFSGFPVVDETRRVLGIVTNRDMRFAADDATPVQAMMTADDLAILR EPADRDEAISLMKARRIEKLLITDGQGALTGLLTLKDTEQAVLNPMACKDPLGRLRVAAATTVGDAGFERSQALIDAGCD LIVIDTAHGHSEGVATAVERVKSLSNEVQVVAGNVATGEATRALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAISD CADAAGDTPVIADGGIKFSGDFAKAIAAGAHCAMVGSMIAGTDESPGEVILYQGRSFKSYRGMGSLGAMARGSADRYFQK DAASDKLVPEGIEGQVPYKGSAGAVVHQLIGGLRAAMGYTGSATVDEMRTKCQFVRITGSGLKESHVHDVQITRESPNYR AG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=483, Percent_Identity=36.4389233954451, Blast_Score=279, Evalue=4e-75, Organism=Homo sapiens, GI217035146, Length=483, Percent_Identity=36.4389233954451, Blast_Score=276, Evalue=3e-74, Organism=Homo sapiens, GI156616279, Length=483, Percent_Identity=36.4389233954451, Blast_Score=275, Evalue=6e-74, Organism=Homo sapiens, GI34328930, Length=483, Percent_Identity=36.4389233954451, Blast_Score=275, Evalue=7e-74, Organism=Homo sapiens, GI34328928, Length=483, Percent_Identity=36.4389233954451, Blast_Score=275, Evalue=8e-74, Organism=Homo sapiens, GI217035152, Length=477, Percent_Identity=36.4779874213836, Blast_Score=269, Evalue=4e-72, Organism=Homo sapiens, GI217035148, Length=483, Percent_Identity=35.6107660455487, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI217035150, Length=480, Percent_Identity=33.9583333333333, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI50541954, Length=260, Percent_Identity=37.3076923076923, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI50541952, Length=260, Percent_Identity=37.3076923076923, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI50541948, Length=260, Percent_Identity=37.3076923076923, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI50541956, Length=257, Percent_Identity=37.7431906614786, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI156104880, Length=257, Percent_Identity=37.3540856031128, Blast_Score=163, Evalue=3e-40, Organism=Escherichia coli, GI1788855, Length=482, Percent_Identity=58.7136929460581, Blast_Score=545, Evalue=1e-156, Organism=Escherichia coli, GI1786293, Length=262, Percent_Identity=36.6412213740458, Blast_Score=161, Evalue=1e-40, Organism=Caenorhabditis elegans, GI71994385, Length=505, Percent_Identity=35.6435643564356, Blast_Score=255, Evalue=3e-68, Organism=Caenorhabditis elegans, GI71994389, Length=426, Percent_Identity=37.793427230047, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17560440, Length=239, Percent_Identity=39.3305439330544, Blast_Score=170, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6322012, Length=493, Percent_Identity=36.9168356997972, Blast_Score=303, Evalue=4e-83, Organism=Saccharomyces cerevisiae, GI6323464, Length=493, Percent_Identity=37.3225152129817, Blast_Score=298, Evalue=2e-81, Organism=Saccharomyces cerevisiae, GI6323585, Length=485, Percent_Identity=35.6701030927835, Blast_Score=293, Evalue=3e-80, Organism=Saccharomyces cerevisiae, GI6319352, Length=348, Percent_Identity=36.7816091954023, Blast_Score=229, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6319353, Length=116, Percent_Identity=36.2068965517241, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI24641071, Length=480, Percent_Identity=35.8333333333333, Blast_Score=281, Evalue=5e-76, Organism=Drosophila melanogaster, GI24641073, Length=480, Percent_Identity=35.8333333333333, Blast_Score=281, Evalue=5e-76, Organism=Drosophila melanogaster, GI28571163, Length=438, Percent_Identity=35.6164383561644, Blast_Score=249, Evalue=3e-66,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 50639; Mature: 50639
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIREALTFDDVLLVPGKSSVLPSDADTRTRVTKSIALNIPLLSSAMDTVTEGRMAIAMA CCHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHEEEECCCHHHHHHHHHHCCCEEEEEE QAGGMGVIHRNLDVDQQAREVRRVKRFESGIVYNPVTLTPDQTLADAKSLMERYGFSGFP CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEECCEEECCCHHHHHHHHHHHHCCCCCCC VVDETRRVLGIVTNRDMRFAADDATPVQAMMTADDLAILREPADRDEAISLMKARRIEKL CHHHHHHHEEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEE LITDGQGALTGLLTLKDTEQAVLNPMACKDPLGRLRVAAATTVGDAGFERSQALIDAGCD EEECCCCCEEEEEEECCCHHHHCCCHHHCCCHHHEEEEEEEECCCCCCHHHHHHHHCCCC LIVIDTAHGHSEGVATAVERVKSLSNEVQVVAGNVATGEATRALIDAGADAVKVGIGPGS EEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCH ICTTRIVAGVGVPQLTAISDCADAAGDTPVIADGGIKFSGDFAKAIAAGAHCAMVGSMIA HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCEEECCHHHHHHHCCCHHHHHHHHHC GTDESPGEVILYQGRSFKSYRGMGSLGAMARGSADRYFQKDAASDKLVPEGIEGQVPYKG CCCCCCCCEEEECCCCCHHHCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC SAGAVVHQLIGGLRAAMGYTGSATVDEMRTKCQFVRITGSGLKESHVHDVQITRESPNYR CCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCCC AG CC >Mature Secondary Structure MEIREALTFDDVLLVPGKSSVLPSDADTRTRVTKSIALNIPLLSSAMDTVTEGRMAIAMA CCHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHEEEECCCHHHHHHHHHHCCCEEEEEE QAGGMGVIHRNLDVDQQAREVRRVKRFESGIVYNPVTLTPDQTLADAKSLMERYGFSGFP CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEECCEEECCCHHHHHHHHHHHHCCCCCCC VVDETRRVLGIVTNRDMRFAADDATPVQAMMTADDLAILREPADRDEAISLMKARRIEKL CHHHHHHHEEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEE LITDGQGALTGLLTLKDTEQAVLNPMACKDPLGRLRVAAATTVGDAGFERSQALIDAGCD EEECCCCCEEEEEEECCCHHHHCCCHHHCCCHHHEEEEEEEECCCCCCHHHHHHHHCCCC LIVIDTAHGHSEGVATAVERVKSLSNEVQVVAGNVATGEATRALIDAGADAVKVGIGPGS EEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCH ICTTRIVAGVGVPQLTAISDCADAAGDTPVIADGGIKFSGDFAKAIAAGAHCAMVGSMIA HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCEEECCHHHHHHHCCCHHHHHHHHHC GTDESPGEVILYQGRSFKSYRGMGSLGAMARGSADRYFQKDAASDKLVPEGIEGQVPYKG CCCCCCCCEEEECCCCCHHHCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC SAGAVVHQLIGGLRAAMGYTGSATVDEMRTKCQFVRITGSGLKESHVHDVQITRESPNYR CCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCCC AG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]