Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054466
Identifier: 89054466
GI number: 89054466
Start: 1969783
End: 1970547
Strand: Reverse
Name: 89054466
Synonym: Jann_1975
Alternate gene names: NA
Gene position: 1970547-1969783 (Counterclockwise)
Preceding gene: 89054467
Following gene: 89054465
Centisome position: 45.64
GC content: 66.14
Gene sequence:
>765_bases GTGGGCGCGGGTGATCGCGCCCCTTCCCCTCCCTCCAAAGGCACTCCGATCCGGGTCGGGGTGCCTTTCGCCATGACAGA GCCCGCATCGTCCAACTGGATCTGGCCCGCCCTGCGGATGCTGCGCCGCCTGGTCTTGATCGCGGTATTGGCGGTGCTGG CGAACTACCTTCTCGGGCTGTCGATGGACATGGCCGAGAGCTTGCCGGAAAGCCAGACCTCGCCGATGCAGACGGTCGTG CTGATGTCGGCGCTGATCGTCTATGCCTTGCTGATTGCCACACCTTTCGTGCCGGGGATCGAAATCGGCCTGGCCCTTCT GCTCCTGCGCGGGGCCTCCATCGCGCCTGCGGTCTATGGCGCGACCGTTCTTGGCCTGATCTTCGCCTTCCTGTTGGGCC GGTATCTGCCTGAGGGGGCCCTGCCGCGCCTTCTGATGGACCTGCGCCTGCGCCGCGCCGGTCGTTACGTGCACCGCATC ACGCAGATGTCCGTGCGATCCCGGGAGGCGGAGCTTGAGGCGCGCATGCCGCGCTGGCTGGCCGTCCCCTTCGTGCGCTA CCGCTATCTGTCGCTGGCCTTGCTGCTGAACCTTCCGGGCAACGTCGTGCTCGGCGGCGGCGGTGGGCTGATGATCATGG CGGGGCTCAGCCGCATCTATCATCCCGTCCAGACGCTGATCACCGTTGCGGTTGCGGTCCTGCCTGTCCCGCTGATGATC TGGTGGTTCGGCACCGGTATGCTCAGCCTTCCGCCCACTTATTGA
Upstream 100 bases:
>100_bases AACTTCCTGCTCAACCACGACGACGGCGGTGGGGCCTGGATCAATTTCAACAAGGATCCCGATGCCGCCCCGCGCCGGGG CCGCGAAGGTGGGCGCAGGC
Downstream 100 bases:
>100_bases CGCCATCGCCGGAACCAGACCCCCATGACCGAAATCCAACCCCTCGTGATCTTCACCCCCTCCGGCAAGCGCGGCCACTT TCCTGTGGGCACGCCGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MGAGDRAPSPPSKGTPIRVGVPFAMTEPASSNWIWPALRMLRRLVLIAVLAVLANYLLGLSMDMAESLPESQTSPMQTVV LMSALIVYALLIATPFVPGIEIGLALLLLRGASIAPAVYGATVLGLIFAFLLGRYLPEGALPRLLMDLRLRRAGRYVHRI TQMSVRSREAELEARMPRWLAVPFVRYRYLSLALLLNLPGNVVLGGGGGLMIMAGLSRIYHPVQTLITVAVAVLPVPLMI WWFGTGMLSLPPTY
Sequences:
>Translated_254_residues MGAGDRAPSPPSKGTPIRVGVPFAMTEPASSNWIWPALRMLRRLVLIAVLAVLANYLLGLSMDMAESLPESQTSPMQTVV LMSALIVYALLIATPFVPGIEIGLALLLLRGASIAPAVYGATVLGLIFAFLLGRYLPEGALPRLLMDLRLRRAGRYVHRI TQMSVRSREAELEARMPRWLAVPFVRYRYLSLALLLNLPGNVVLGGGGGLMIMAGLSRIYHPVQTLITVAVAVLPVPLMI WWFGTGMLSLPPTY >Mature_253_residues GAGDRAPSPPSKGTPIRVGVPFAMTEPASSNWIWPALRMLRRLVLIAVLAVLANYLLGLSMDMAESLPESQTSPMQTVVL MSALIVYALLIATPFVPGIEIGLALLLLRGASIAPAVYGATVLGLIFAFLLGRYLPEGALPRLLMDLRLRRAGRYVHRIT QMSVRSREAELEARMPRWLAVPFVRYRYLSLALLLNLPGNVVLGGGGGLMIMAGLSRIYHPVQTLITVAVAVLPVPLMIW WFGTGMLSLPPTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27598; Mature: 27467
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGDRAPSPPSKGTPIRVGVPFAMTEPASSNWIWPALRMLRRLVLIAVLAVLANYLLGL CCCCCCCCCCCCCCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC SMDMAESLPESQTSPMQTVVLMSALIVYALLIATPFVPGIEIGLALLLLRGASIAPAVYG CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH ATVLGLIFAFLLGRYLPEGALPRLLMDLRLRRAGRYVHRITQMSVRSREAELEARMPRWL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AVPFVRYRYLSLALLLNLPGNVVLGGGGGLMIMAGLSRIYHPVQTLITVAVAVLPVPLMI HHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WWFGTGMLSLPPTY HHHHCCCCCCCCCC >Mature Secondary Structure GAGDRAPSPPSKGTPIRVGVPFAMTEPASSNWIWPALRMLRRLVLIAVLAVLANYLLGL CCCCCCCCCCCCCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC SMDMAESLPESQTSPMQTVVLMSALIVYALLIATPFVPGIEIGLALLLLRGASIAPAVYG CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH ATVLGLIFAFLLGRYLPEGALPRLLMDLRLRRAGRYVHRITQMSVRSREAELEARMPRWL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AVPFVRYRYLSLALLLNLPGNVVLGGGGGLMIMAGLSRIYHPVQTLITVAVAVLPVPLMI HHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WWFGTGMLSLPPTY HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA