Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054423

Identifier: 89054423

GI number: 89054423

Start: 1921489

End: 1922073

Strand: Direct

Name: 89054423

Synonym: Jann_1932

Alternate gene names: NA

Gene position: 1921489-1922073 (Clockwise)

Preceding gene: 89054421

Following gene: 89054424

Centisome position: 44.5

GC content: 62.56

Gene sequence:

>585_bases
ATGACCACCCGCCTTCTTCTTTCCGCCGCCGCCATCGCGGTGTCTGCCAGTGCGGCCTATGCCGATGGGCACGCATGTAC
GTTTGACGCGGAAATCCCCGATTTCACGCAGGAGCAGATTGATGCCCTGTATGAGTGCGTACGTGACGAATTGCCGGCCG
CCTATGGCGCGGGCGACAACGAGGTCGCGGCCGTCTACCGCGAGTGGGAGGCTGCGGCCACCGGCCCCGCAGCCCCAGGC
TTTCACGGCGGACGGTTCCTGAACACCTTCGTGAATGAAACGGGCTACGCCGAATACATCCGCTATGAGGACGATGATGA
GGCGTTCGAGATGCCCGTGGGCACTGTCATCGCCAAGGAATCCTACACCCTGCGCGACAATGCACCCCGTATCGGGCCGC
TGTTCATCATGACGCGCGGCGAGACGGCGGATTATCCCGACACCGATGGCTGGATCTATTCCGCCGTGCAGCCCAATGGC
GACCCCATGGGGATTTCGCAGTCGTTCTGTCACGATTGCCACGGCGGCTTCTCCTTCTCCGATAGTCTGGGCTACCCGGC
TTTCGAGGTGCGCCTGGGCGAATAG

Upstream 100 bases:

>100_bases
CGCTTTGTGAACGCCCGTGAGTTTCCTTTGTGTTTCCTTCGCGCGCAGCCTCGGGCTAGCGTCCGTATACCAAGGGACAC
CAACCAGCAGGACAGCCAGT

Downstream 100 bases:

>100_bases
CCTGCGGCGATCCGGCCCCCGATGCACCGCCATGGGGGGCCGTTTGCCGTAACGTCCGCGCCTTTGATCCAGATCAAAGC
CCGCCTCGCGGCAAATTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTTRLLLSAAAIAVSASAAYADGHACTFDAEIPDFTQEQIDALYECVRDELPAAYGAGDNEVAAVYREWEAAATGPAAPG
FHGGRFLNTFVNETGYAEYIRYEDDDEAFEMPVGTVIAKESYTLRDNAPRIGPLFIMTRGETADYPDTDGWIYSAVQPNG
DPMGISQSFCHDCHGGFSFSDSLGYPAFEVRLGE

Sequences:

>Translated_194_residues
MTTRLLLSAAAIAVSASAAYADGHACTFDAEIPDFTQEQIDALYECVRDELPAAYGAGDNEVAAVYREWEAAATGPAAPG
FHGGRFLNTFVNETGYAEYIRYEDDDEAFEMPVGTVIAKESYTLRDNAPRIGPLFIMTRGETADYPDTDGWIYSAVQPNG
DPMGISQSFCHDCHGGFSFSDSLGYPAFEVRLGE
>Mature_193_residues
TTRLLLSAAAIAVSASAAYADGHACTFDAEIPDFTQEQIDALYECVRDELPAAYGAGDNEVAAVYREWEAAATGPAAPGF
HGGRFLNTFVNETGYAEYIRYEDDDEAFEMPVGTVIAKESYTLRDNAPRIGPLFIMTRGETADYPDTDGWIYSAVQPNGD
PMGISQSFCHDCHGGFSFSDSLGYPAFEVRLGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21026; Mature: 20895

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRLLLSAAAIAVSASAAYADGHACTFDAEIPDFTQEQIDALYECVRDELPAAYGAGDN
CCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCC
EVAAVYREWEAAATGPAAPGFHGGRFLNTFVNETGYAEYIRYEDDDEAFEMPVGTVIAKE
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCEEEECC
SYTLRDNAPRIGPLFIMTRGETADYPDTDGWIYSAVQPNGDPMGISQSFCHDCHGGFSFS
CEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCC
DSLGYPAFEVRLGE
CCCCCCEEEEEECC
>Mature Secondary Structure 
TTRLLLSAAAIAVSASAAYADGHACTFDAEIPDFTQEQIDALYECVRDELPAAYGAGDN
CHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCC
EVAAVYREWEAAATGPAAPGFHGGRFLNTFVNETGYAEYIRYEDDDEAFEMPVGTVIAKE
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCEEEECC
SYTLRDNAPRIGPLFIMTRGETADYPDTDGWIYSAVQPNGDPMGISQSFCHDCHGGFSFS
CEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCC
DSLGYPAFEVRLGE
CCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA