Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054423
Identifier: 89054423
GI number: 89054423
Start: 1921489
End: 1922073
Strand: Direct
Name: 89054423
Synonym: Jann_1932
Alternate gene names: NA
Gene position: 1921489-1922073 (Clockwise)
Preceding gene: 89054421
Following gene: 89054424
Centisome position: 44.5
GC content: 62.56
Gene sequence:
>585_bases ATGACCACCCGCCTTCTTCTTTCCGCCGCCGCCATCGCGGTGTCTGCCAGTGCGGCCTATGCCGATGGGCACGCATGTAC GTTTGACGCGGAAATCCCCGATTTCACGCAGGAGCAGATTGATGCCCTGTATGAGTGCGTACGTGACGAATTGCCGGCCG CCTATGGCGCGGGCGACAACGAGGTCGCGGCCGTCTACCGCGAGTGGGAGGCTGCGGCCACCGGCCCCGCAGCCCCAGGC TTTCACGGCGGACGGTTCCTGAACACCTTCGTGAATGAAACGGGCTACGCCGAATACATCCGCTATGAGGACGATGATGA GGCGTTCGAGATGCCCGTGGGCACTGTCATCGCCAAGGAATCCTACACCCTGCGCGACAATGCACCCCGTATCGGGCCGC TGTTCATCATGACGCGCGGCGAGACGGCGGATTATCCCGACACCGATGGCTGGATCTATTCCGCCGTGCAGCCCAATGGC GACCCCATGGGGATTTCGCAGTCGTTCTGTCACGATTGCCACGGCGGCTTCTCCTTCTCCGATAGTCTGGGCTACCCGGC TTTCGAGGTGCGCCTGGGCGAATAG
Upstream 100 bases:
>100_bases CGCTTTGTGAACGCCCGTGAGTTTCCTTTGTGTTTCCTTCGCGCGCAGCCTCGGGCTAGCGTCCGTATACCAAGGGACAC CAACCAGCAGGACAGCCAGT
Downstream 100 bases:
>100_bases CCTGCGGCGATCCGGCCCCCGATGCACCGCCATGGGGGGCCGTTTGCCGTAACGTCCGCGCCTTTGATCCAGATCAAAGC CCGCCTCGCGGCAAATTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTTRLLLSAAAIAVSASAAYADGHACTFDAEIPDFTQEQIDALYECVRDELPAAYGAGDNEVAAVYREWEAAATGPAAPG FHGGRFLNTFVNETGYAEYIRYEDDDEAFEMPVGTVIAKESYTLRDNAPRIGPLFIMTRGETADYPDTDGWIYSAVQPNG DPMGISQSFCHDCHGGFSFSDSLGYPAFEVRLGE
Sequences:
>Translated_194_residues MTTRLLLSAAAIAVSASAAYADGHACTFDAEIPDFTQEQIDALYECVRDELPAAYGAGDNEVAAVYREWEAAATGPAAPG FHGGRFLNTFVNETGYAEYIRYEDDDEAFEMPVGTVIAKESYTLRDNAPRIGPLFIMTRGETADYPDTDGWIYSAVQPNG DPMGISQSFCHDCHGGFSFSDSLGYPAFEVRLGE >Mature_193_residues TTRLLLSAAAIAVSASAAYADGHACTFDAEIPDFTQEQIDALYECVRDELPAAYGAGDNEVAAVYREWEAAATGPAAPGF HGGRFLNTFVNETGYAEYIRYEDDDEAFEMPVGTVIAKESYTLRDNAPRIGPLFIMTRGETADYPDTDGWIYSAVQPNGD PMGISQSFCHDCHGGFSFSDSLGYPAFEVRLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21026; Mature: 20895
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRLLLSAAAIAVSASAAYADGHACTFDAEIPDFTQEQIDALYECVRDELPAAYGAGDN CCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCC EVAAVYREWEAAATGPAAPGFHGGRFLNTFVNETGYAEYIRYEDDDEAFEMPVGTVIAKE HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCEEEECC SYTLRDNAPRIGPLFIMTRGETADYPDTDGWIYSAVQPNGDPMGISQSFCHDCHGGFSFS CEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCC DSLGYPAFEVRLGE CCCCCCEEEEEECC >Mature Secondary Structure TTRLLLSAAAIAVSASAAYADGHACTFDAEIPDFTQEQIDALYECVRDELPAAYGAGDN CHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCC EVAAVYREWEAAATGPAAPGFHGGRFLNTFVNETGYAEYIRYEDDDEAFEMPVGTVIAKE HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCEEEECC SYTLRDNAPRIGPLFIMTRGETADYPDTDGWIYSAVQPNGDPMGISQSFCHDCHGGFSFS CEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCC DSLGYPAFEVRLGE CCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA