Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054386

Identifier: 89054386

GI number: 89054386

Start: 1882580

End: 1883164

Strand: Reverse

Name: 89054386

Synonym: Jann_1895

Alternate gene names: NA

Gene position: 1883164-1882580 (Counterclockwise)

Preceding gene: 89054387

Following gene: 89054385

Centisome position: 43.61

GC content: 64.44

Gene sequence:

>585_bases
ATGACACGCAGACCCGCCACGCGACTTGCTGCGCTTTGCGCGCTCTGTGTCCTGCCTGGGCACGCAAGCGCCCAGGGGGC
CGTCGATGCGCTCTTTGATCTGCTCTGCGGGCGGACGGTGCATTACTACGACACGTCGGGCAATCAGATCGAATACACGT
CGGGCGATGGCACGGCGTTCCTATGGTTCCATGGCGTCGAAGATGTGATCGTGGGCACCTGGGCCGTTTACAGCGATGCG
GAGGTGTTTGAGCTGCAAAACGACGGCTCCGGCGATACCGAGCGCGATGGCGGTCTGGATAGCGGTGATCTGTTCAACAC
GCCCACGGCGGGCGCGCAGGTTTGTTTTGAATACCCCCCCGGCGGCTTTGGCCCGCTGGACCCCGGCGGTTTCCACTGCT
GGGATGAGGTGCGGCTGTTTGAGACCGTGGTGGAAGGCGGCGTCTTCCCCGGCGACCGCTACGGCCTGCGCGACGGGGAG
CCGCCTTACCTGCTGCCCGAACATCCCTTCCAGAGGTTGGAGACCTTTGACGCTGATTTCCCGCAACTGCCGCCCGAACC
CGCCTGCGGTGTGCCGATCTCGTGA

Upstream 100 bases:

>100_bases
CAACAGGATATAAGTCGGAGCGGACGAGCCTTAGGCAGGTGCCGTGGGCGCGGTTCAGGAAAATCGAGACGATGGCAGAT
TTGTTTGAGAGGCTTTTTCC

Downstream 100 bases:

>100_bases
TACGTTTGGCTGCCCTTTGTCTGTTGATGGCCGTGCCCGCACAAGCCCAGGATTTTCGAGGCGTTTCTATCGGGGATCCG
ACGTCCAGCCTCGCCGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTRRPATRLAALCALCVLPGHASAQGAVDALFDLLCGRTVHYYDTSGNQIEYTSGDGTAFLWFHGVEDVIVGTWAVYSDA
EVFELQNDGSGDTERDGGLDSGDLFNTPTAGAQVCFEYPPGGFGPLDPGGFHCWDEVRLFETVVEGGVFPGDRYGLRDGE
PPYLLPEHPFQRLETFDADFPQLPPEPACGVPIS

Sequences:

>Translated_194_residues
MTRRPATRLAALCALCVLPGHASAQGAVDALFDLLCGRTVHYYDTSGNQIEYTSGDGTAFLWFHGVEDVIVGTWAVYSDA
EVFELQNDGSGDTERDGGLDSGDLFNTPTAGAQVCFEYPPGGFGPLDPGGFHCWDEVRLFETVVEGGVFPGDRYGLRDGE
PPYLLPEHPFQRLETFDADFPQLPPEPACGVPIS
>Mature_193_residues
TRRPATRLAALCALCVLPGHASAQGAVDALFDLLCGRTVHYYDTSGNQIEYTSGDGTAFLWFHGVEDVIVGTWAVYSDAE
VFELQNDGSGDTERDGGLDSGDLFNTPTAGAQVCFEYPPGGFGPLDPGGFHCWDEVRLFETVVEGGVFPGDRYGLRDGEP
PYLLPEHPFQRLETFDADFPQLPPEPACGVPIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20950; Mature: 20819

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRPATRLAALCALCVLPGHASAQGAVDALFDLLCGRTVHYYDTSGNQIEYTSGDGTAF
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCEEE
LWFHGVEDVIVGTWAVYSDAEVFELQNDGSGDTERDGGLDSGDLFNTPTAGAQVCFEYPP
EEECCCCHHHEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
GGFGPLDPGGFHCWDEVRLFETVVEGGVFPGDRYGLRDGEPPYLLPEHPFQRLETFDADF
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHCCCCC
PQLPPEPACGVPIS
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TRRPATRLAALCALCVLPGHASAQGAVDALFDLLCGRTVHYYDTSGNQIEYTSGDGTAF
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCEEE
LWFHGVEDVIVGTWAVYSDAEVFELQNDGSGDTERDGGLDSGDLFNTPTAGAQVCFEYPP
EEECCCCHHHEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
GGFGPLDPGGFHCWDEVRLFETVVEGGVFPGDRYGLRDGEPPYLLPEHPFQRLETFDADF
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHCCCCC
PQLPPEPACGVPIS
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA