Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054355
Identifier: 89054355
GI number: 89054355
Start: 1850293
End: 1852341
Strand: Reverse
Name: 89054355
Synonym: Jann_1864
Alternate gene names: NA
Gene position: 1852341-1850293 (Counterclockwise)
Preceding gene: 89054356
Following gene: 89054354
Centisome position: 42.9
GC content: 62.13
Gene sequence:
>2049_bases ATGAGCAGCGACCGCCAGCAACTCGCCGAACACGGCACGGGCCTCTGTGTCGCGGGGCTTGCGGCACTCGGCGTAAGCGC GCCGCCCCTGATCCCCCTCGCCGTGCTTGCCGCATGGGGCCTCGACCGGTTCAGATCCTGCAAAGACCGCCGCACACGCG CGACCATCGACACAATCGTCAAACAGATTGAGAAGTCCAACCCCGACCACCGCGCCGTCGCGCCTGCCCTCGCGCTCCTG AAAGACAATCGGCACAAGGTCACCATCACCGCCGCCCATCTGGCAAACGCCGAAACCCGTGGCGACTTCCCCAATGCCCT CTACGACATCGTCTTCAAAGGCGTCTCCGTCCCCACCGATGACGGCGTTGAAGCCCTCCTCCGCATGATCCTCACCACCG CCTGGCAGGACCTCCGACTGGAGGACGCCTACAACAAAGTCTTCCTGCAAGAAGGCATCACGGCGCTGGAACGGGACCTC GCAGACGGGTTCTCGCGGATCGAGGCCAAACTCGATCAGGTTCAGCGGGTCGGATCCGATACGAATCAACGGGTCCGCTC CCTCGAAACCATGGTCTCTGATCTGAAGGACATGCTTGGCAGCAGCAAGACCCTCCTGTCCCCCGCCGCGCAGGATCTGA CTCACCAAAATGAGCTAATAGAAGCGCTCGCAAGCCGCTACGCGTCCGAGACCCCGGACAACCTGCAAACCGCCCTTCTA GGCATGGCCCAGGCACTTGAAACCAGCGCGAGTAAGCGCGATTCAACCGCGCCGCATAAAGGCAAGGGGCTCGATATCAC GACCCTGTCGGCAGAACTTGAGACGCTCAACAGCATTGGCCGGTTGGACGACGCACAGGCAGCGCTCGGTGCGGCCGCGC AGGCCCACAACACCGATGCGCGTGCATTGTCCGAGCTTTCGATTACGCAAGCCATGCTGGCAGGCAACTCAGCCGCCGTC GCAGAAGTCGAACGCAAACGCTGCATGAACAACGATGGTCCGCAAGAGGTGTTCGAAGATCTCCTGATGTCCACTCAGTC CTGGTGCACCTCCGGCCAGGAAAAGGGCATCGCCTTCAATCTGGCGGTCGCAATCGCCTGCGCCCGACACGCCTGCGACT GGGCCCAAAGCGCGCCGAATAGGTTTTCGGCGTCTCTCTCCCTGGGCACCGCATTGCTTGCCCTCGCGCGACTGGATGGG CACCGCGCGGGCCTGGACGAGGCCGCCCGGGTCCTCCGAAGCGCGCTGACGGATGACAGCGATGACCTAGACCCCACGGA CCGGGTGTCCGCACGGGTCACCTTGGCCAATATCCTTCTTGAATTGAGTGAACGCATCAGCGGCGACTACCGATATCCCG AAGCGGCGATCTTGGCCAAGGACGCGCTCACGCTGTGTGATCGACAAACCGGCCCGCGTTTGTGGGGCCACACCACCAAC GCGTTAGGAACCTGCCTTGTTGCAAGCGGTCGCGCGTTCATGGACCCCGCCCATATCCGGGCAGGTATTGCCAATTATGA GGCCGCCAGCCAGGTGCTGACCGAAGATATGGTCCCTCTGGACTGGGCGCGCGGTCAGGCCAGTTTGGGCGACGCTCTTC TGGCATTGCATGGCTGCTGGGACGGGGACGATGCTTTACTCGACCAGGCCACCACAGCCTATCGAAACGCCAAGAAGCAC ATCCTTCTGGACCGCATTGTCGAGAGAAGTGAAATCGACCTCCGCCTTGGGGAGGCCATTGCCCGCCGGGCACGGTCCAC GTTGGATTTTGGGGATTTCAGATCGGCGCTTGTGCACGTTGCCGACGCTCAAGGGGTGTTTTACACGACGCGCAGCACAC TTTCGATGGCCGTTGCCGAAAGCCTCCGGATGCATCTGATGGTGACCCGCTTCTATATCACCGGTAGACAAGATGATCTT GAGGCCGCCGCCACCTATGCCCAAGCGGCCCGAACAGGGTTTGAGCAGACAGGCGCCAGTCGATATCTCGCGGCCCTTGC GGAAGACGAGCAGGATATTGTCGACGCGCGAGCAACTCTGTCCCCCTGA
Upstream 100 bases:
>100_bases TCATGACACCTCCCCGTTGGGGGAGCGCGCGCCTCTATTTCCCCTGTTGACGTTGGGTCATAATCCCCACCTAATCCCTT GAAAGGATTGGACAGGGTAG
Downstream 100 bases:
>100_bases CAAACGCTCGCGACTCCGGGAAGAAATATGCGCCCTTGCAACGGCCTCTCCCCGCACCGAATGCGTCGTTTTTGCCGATG TCAGTGCGAAAATCGTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 682; Mature: 681
Protein sequence:
>682_residues MSSDRQQLAEHGTGLCVAGLAALGVSAPPLIPLAVLAAWGLDRFRSCKDRRTRATIDTIVKQIEKSNPDHRAVAPALALL KDNRHKVTITAAHLANAETRGDFPNALYDIVFKGVSVPTDDGVEALLRMILTTAWQDLRLEDAYNKVFLQEGITALERDL ADGFSRIEAKLDQVQRVGSDTNQRVRSLETMVSDLKDMLGSSKTLLSPAAQDLTHQNELIEALASRYASETPDNLQTALL GMAQALETSASKRDSTAPHKGKGLDITTLSAELETLNSIGRLDDAQAALGAAAQAHNTDARALSELSITQAMLAGNSAAV AEVERKRCMNNDGPQEVFEDLLMSTQSWCTSGQEKGIAFNLAVAIACARHACDWAQSAPNRFSASLSLGTALLALARLDG HRAGLDEAARVLRSALTDDSDDLDPTDRVSARVTLANILLELSERISGDYRYPEAAILAKDALTLCDRQTGPRLWGHTTN ALGTCLVASGRAFMDPAHIRAGIANYEAASQVLTEDMVPLDWARGQASLGDALLALHGCWDGDDALLDQATTAYRNAKKH ILLDRIVERSEIDLRLGEAIARRARSTLDFGDFRSALVHVADAQGVFYTTRSTLSMAVAESLRMHLMVTRFYITGRQDDL EAAATYAQAARTGFEQTGASRYLAALAEDEQDIVDARATLSP
Sequences:
>Translated_682_residues MSSDRQQLAEHGTGLCVAGLAALGVSAPPLIPLAVLAAWGLDRFRSCKDRRTRATIDTIVKQIEKSNPDHRAVAPALALL KDNRHKVTITAAHLANAETRGDFPNALYDIVFKGVSVPTDDGVEALLRMILTTAWQDLRLEDAYNKVFLQEGITALERDL ADGFSRIEAKLDQVQRVGSDTNQRVRSLETMVSDLKDMLGSSKTLLSPAAQDLTHQNELIEALASRYASETPDNLQTALL GMAQALETSASKRDSTAPHKGKGLDITTLSAELETLNSIGRLDDAQAALGAAAQAHNTDARALSELSITQAMLAGNSAAV AEVERKRCMNNDGPQEVFEDLLMSTQSWCTSGQEKGIAFNLAVAIACARHACDWAQSAPNRFSASLSLGTALLALARLDG HRAGLDEAARVLRSALTDDSDDLDPTDRVSARVTLANILLELSERISGDYRYPEAAILAKDALTLCDRQTGPRLWGHTTN ALGTCLVASGRAFMDPAHIRAGIANYEAASQVLTEDMVPLDWARGQASLGDALLALHGCWDGDDALLDQATTAYRNAKKH ILLDRIVERSEIDLRLGEAIARRARSTLDFGDFRSALVHVADAQGVFYTTRSTLSMAVAESLRMHLMVTRFYITGRQDDL EAAATYAQAARTGFEQTGASRYLAALAEDEQDIVDARATLSP >Mature_681_residues SSDRQQLAEHGTGLCVAGLAALGVSAPPLIPLAVLAAWGLDRFRSCKDRRTRATIDTIVKQIEKSNPDHRAVAPALALLK DNRHKVTITAAHLANAETRGDFPNALYDIVFKGVSVPTDDGVEALLRMILTTAWQDLRLEDAYNKVFLQEGITALERDLA DGFSRIEAKLDQVQRVGSDTNQRVRSLETMVSDLKDMLGSSKTLLSPAAQDLTHQNELIEALASRYASETPDNLQTALLG MAQALETSASKRDSTAPHKGKGLDITTLSAELETLNSIGRLDDAQAALGAAAQAHNTDARALSELSITQAMLAGNSAAVA EVERKRCMNNDGPQEVFEDLLMSTQSWCTSGQEKGIAFNLAVAIACARHACDWAQSAPNRFSASLSLGTALLALARLDGH RAGLDEAARVLRSALTDDSDDLDPTDRVSARVTLANILLELSERISGDYRYPEAAILAKDALTLCDRQTGPRLWGHTTNA LGTCLVASGRAFMDPAHIRAGIANYEAASQVLTEDMVPLDWARGQASLGDALLALHGCWDGDDALLDQATTAYRNAKKHI LLDRIVERSEIDLRLGEAIARRARSTLDFGDFRSALVHVADAQGVFYTTRSTLSMAVAESLRMHLMVTRFYITGRQDDLE AAATYAQAARTGFEQTGASRYLAALAEDEQDIVDARATLSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73586; Mature: 73454
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDRQQLAEHGTGLCVAGLAALGVSAPPLIPLAVLAAWGLDRFRSCKDRRTRATIDTIV CCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH KQIEKSNPDHRAVAPALALLKDNRHKVTITAAHLANAETRGDFPNALYDIVFKGVSVPTD HHHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC DGVEALLRMILTTAWQDLRLEDAYNKVFLQEGITALERDLADGFSRIEAKLDQVQRVGSD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TNQRVRSLETMVSDLKDMLGSSKTLLSPAAQDLTHQNELIEALASRYASETPDNLQTALL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GMAQALETSASKRDSTAPHKGKGLDITTLSAELETLNSIGRLDDAQAALGAAAQAHNTDA HHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH RALSELSITQAMLAGNSAAVAEVERKRCMNNDGPQEVFEDLLMSTQSWCTSGQEKGIAFN HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHH LAVAIACARHACDWAQSAPNRFSASLSLGTALLALARLDGHRAGLDEAARVLRSALTDDS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC DDLDPTDRVSARVTLANILLELSERISGDYRYPEAAILAKDALTLCDRQTGPRLWGHTTN CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH ALGTCLVASGRAFMDPAHIRAGIANYEAASQVLTEDMVPLDWARGQASLGDALLALHGCW HHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC DGDDALLDQATTAYRNAKKHILLDRIVERSEIDLRLGEAIARRARSTLDFGDFRSALVHV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ADAQGVFYTTRSTLSMAVAESLRMHLMVTRFYITGRQDDLEAAATYAQAARTGFEQTGAS HCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCHHHCCHH RYLAALAEDEQDIVDARATLSP HHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure SSDRQQLAEHGTGLCVAGLAALGVSAPPLIPLAVLAAWGLDRFRSCKDRRTRATIDTIV CCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH KQIEKSNPDHRAVAPALALLKDNRHKVTITAAHLANAETRGDFPNALYDIVFKGVSVPTD HHHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC DGVEALLRMILTTAWQDLRLEDAYNKVFLQEGITALERDLADGFSRIEAKLDQVQRVGSD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TNQRVRSLETMVSDLKDMLGSSKTLLSPAAQDLTHQNELIEALASRYASETPDNLQTALL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GMAQALETSASKRDSTAPHKGKGLDITTLSAELETLNSIGRLDDAQAALGAAAQAHNTDA HHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH RALSELSITQAMLAGNSAAVAEVERKRCMNNDGPQEVFEDLLMSTQSWCTSGQEKGIAFN HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHH LAVAIACARHACDWAQSAPNRFSASLSLGTALLALARLDGHRAGLDEAARVLRSALTDDS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC DDLDPTDRVSARVTLANILLELSERISGDYRYPEAAILAKDALTLCDRQTGPRLWGHTTN CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH ALGTCLVASGRAFMDPAHIRAGIANYEAASQVLTEDMVPLDWARGQASLGDALLALHGCW HHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC DGDDALLDQATTAYRNAKKHILLDRIVERSEIDLRLGEAIARRARSTLDFGDFRSALVHV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ADAQGVFYTTRSTLSMAVAESLRMHLMVTRFYITGRQDDLEAAATYAQAARTGFEQTGAS HCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCHHHCCHH RYLAALAEDEQDIVDARATLSP HHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA