Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is sam [H]

Identifier: 89054289

GI number: 89054289

Start: 1787308

End: 1788168

Strand: Reverse

Name: sam [H]

Synonym: Jann_1798

Alternate gene names: 89054289

Gene position: 1788168-1787308 (Counterclockwise)

Preceding gene: 89054290

Following gene: 89054288

Centisome position: 41.41

GC content: 64.46

Gene sequence:

>861_bases
ATGGACAACCTCAAAGGCATGGGCTGGATGACGCTGGCGATGCTGGGGTTTGCCCTGGCGGACACCTTCATCAAGCTGAC
CCTCGGCGCATTGCCCGTGGGCCAGGTCATCGCCATTTTCGGGTTCGGCGGCGCGTTGATCTTCGGCGGATGGGCCGCGG
CCAAGGGCGAGCGTGTCTTTGACGCTGCGCTGTTCACCGGGCCGTTTGTGCTGCGTTTGGGGGCGGAAGTCTTGGGCACG
CTGTGCTTCATCATTGCGCTGGCCTCCATCGAATTGTCGCTTCTGTCGGCGATCATTCAGGCCAATCCGCTTCTTGTGAC
CCTGGGCGCGGCTTTGTTTCTAGGGGCCAGCGTCGGATGGCGGCGGTGGGTCGCGATCCTGATCGGCCTTTTGGGCGTCC
TGATCATCGTGCGTCCGGGCCTGGAGGGGTTTGACGTCAACAGCCTCTGGGCGCTGGGGGCGGCCGTCGGTCTGACCGGG
CGCGATCTGGCAACGCGGGCAATTTCACGCGATGTGTCGACGCTGTTGCTAGCGGGATGGGGCTTTGCCGCCGCGGGCAT
GGCGGGGCTATTGTTATTGGCCGTTACCGGAGGCGCGACCCTGCCCGGCGGGTTGCTGAGCCTGCAATTGACCGGTGCCT
TGATCTTTGCGCTTGTGGCCTATTACGCCGTGACCGCCGCGATGCGCATCGGTGACATCCCCGTTGTCACGCCGTTCCGC
TACACGCGGCTGGTCTTCGCCCTGATCCTTGCCTTCTTCGTGTTCGGAGAGCGGCCGGACATGTGGACGCTTGTGGGCGC
CGCCATTGTCATTGCGACCGGGCTCTACACCCTCTGGCGAGAGCGGCTGGCGACGACCTGA

Upstream 100 bases:

>100_bases
CGGGGGGAGGTGTACCTGCCCAGATGAAGGAGCGGCGGTTTGCGCTGTTGTCCGAGCCTGGATCGGCGTAAGGCCGGGCC
TGCACAGCATGGGAGCGGGC

Downstream 100 bases:

>100_bases
GCCCGCCTGTTACCGCTAACGGAAATGTTTGCCCCGGATGAAACCTCTGCTATAGCGCCGGCAACCCCATACCTTAGGAG
ACCAATCCATGAGCGTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MDNLKGMGWMTLAMLGFALADTFIKLTLGALPVGQVIAIFGFGGALIFGGWAAAKGERVFDAALFTGPFVLRLGAEVLGT
LCFIIALASIELSLLSAIIQANPLLVTLGAALFLGASVGWRRWVAILIGLLGVLIIVRPGLEGFDVNSLWALGAAVGLTG
RDLATRAISRDVSTLLLAGWGFAAAGMAGLLLLAVTGGATLPGGLLSLQLTGALIFALVAYYAVTAAMRIGDIPVVTPFR
YTRLVFALILAFFVFGERPDMWTLVGAAIVIATGLYTLWRERLATT

Sequences:

>Translated_286_residues
MDNLKGMGWMTLAMLGFALADTFIKLTLGALPVGQVIAIFGFGGALIFGGWAAAKGERVFDAALFTGPFVLRLGAEVLGT
LCFIIALASIELSLLSAIIQANPLLVTLGAALFLGASVGWRRWVAILIGLLGVLIIVRPGLEGFDVNSLWALGAAVGLTG
RDLATRAISRDVSTLLLAGWGFAAAGMAGLLLLAVTGGATLPGGLLSLQLTGALIFALVAYYAVTAAMRIGDIPVVTPFR
YTRLVFALILAFFVFGERPDMWTLVGAAIVIATGLYTLWRERLATT
>Mature_286_residues
MDNLKGMGWMTLAMLGFALADTFIKLTLGALPVGQVIAIFGFGGALIFGGWAAAKGERVFDAALFTGPFVLRLGAEVLGT
LCFIIALASIELSLLSAIIQANPLLVTLGAALFLGASVGWRRWVAILIGLLGVLIIVRPGLEGFDVNSLWALGAAVGLTG
RDLATRAISRDVSTLLLAGWGFAAAGMAGLLLLAVTGGATLPGGLLSLQLTGALIFALVAYYAVTAAMRIGDIPVVTPFR
YTRLVFALILAFFVFGERPDMWTLVGAAIVIATGLYTLWRERLATT

Specific function: Transports S-adenosylmethionine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 29887; Mature: 29887

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLKGMGWMTLAMLGFALADTFIKLTLGALPVGQVIAIFGFGGALIFGGWAAAKGERVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCHHHCCCCHHH
DAALFTGPFVLRLGAEVLGTLCFIIALASIELSLLSAIIQANPLLVTLGAALFLGASVGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHH
RRWVAILIGLLGVLIIVRPGLEGFDVNSLWALGAAVGLTGRDLATRAISRDVSTLLLAGW
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GFAAAGMAGLLLLAVTGGATLPGGLLSLQLTGALIFALVAYYAVTAAMRIGDIPVVTPFR
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
YTRLVFALILAFFVFGERPDMWTLVGAAIVIATGLYTLWRERLATT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNLKGMGWMTLAMLGFALADTFIKLTLGALPVGQVIAIFGFGGALIFGGWAAAKGERVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCHHHCCCCHHH
DAALFTGPFVLRLGAEVLGTLCFIIALASIELSLLSAIIQANPLLVTLGAALFLGASVGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHH
RRWVAILIGLLGVLIIVRPGLEGFDVNSLWALGAAVGLTGRDLATRAISRDVSTLLLAGW
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GFAAAGMAGLLLLAVTGGATLPGGLLSLQLTGALIFALVAYYAVTAAMRIGDIPVVTPFR
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
YTRLVFALILAFFVFGERPDMWTLVGAAIVIATGLYTLWRERLATT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]