Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054215

Identifier: 89054215

GI number: 89054215

Start: 1714118

End: 1714864

Strand: Reverse

Name: 89054215

Synonym: Jann_1724

Alternate gene names: NA

Gene position: 1714864-1714118 (Counterclockwise)

Preceding gene: 89054216

Following gene: 89054212

Centisome position: 39.71

GC content: 64.26

Gene sequence:

>747_bases
ATGTTGAGATCCGCAATCCTTGCCCTGTCCATCTGCGTGGCGCTGCCCGCATCCGCCGCCACGGTCGCTCAATTCAACAG
CTCCGTCGGTGTCACGGTCCAGACCTCCGCCGCCAATACGATCACCGAGAGCCACGGCTATCAGCCCGGCCCCTCCTCCA
TCGTGACCAGCGGAGATTTCGGGTTGGTGACCGGCGATGACAACGGCACCGACACTTGCTGCACCGGCAGCCTGATCAAC
ACCACCAACCCCGTCGATCTGGGAGAAGCCGCCCTGTCGGCCACCGGGTCGGTCAATTCCGTGGGCTCGGTCTTTGCAGA
AGGGGAGCGTCGCGCGCTCTGGAGTTTCAGCAACGTGGGTCCCGTCACCCAGTCCCTCATCCTGACCTTCGACATCGAAA
CGGCGATCTCCCAGGCGATTGACCCGCTGGTGGGCGGGGCGGCTGCATCCGGCACCGAGGTGCGGATCGAGCGCGATGGC
GTGGTGATCTACAACGAAGGCTTGGACGCGGTCATTGAAGAGCTCGCCCTCGGCACGGCCAATAGTGAGCTGTTCGTCTA
CAATTTCGACCTCCCCTCCACGGGCAGAACATCGACAACCTTCAACGTGTTCGTCAGCGGCTATGTAGGCGTGTCGTCCG
ACCCGTCCGAGGTCATGTCACCGGTGCCGCTGCCCGCCGGTGCCGTGCTTCTGGTCGCAGGTCTCGGCGCATTGGGTGCC
CTGCGTCGCGTCACGTCGCGCGGCTGA

Upstream 100 bases:

>100_bases
GCCGCGGCCAGCGCATTCTTCGCAGGCTTTCATTTAAACATTTTCAACCCGGCAGATGCGCGTTTCCCCCGTATCCGCCC
CCCATTTCAGGAGATCCCCC

Downstream 100 bases:

>100_bases
CATCGGGGCATAGAGATCCAGGCACGCGGCGCGCTATTCCGCCGCGTGCTTTCGCGCATCCAGCATCGGGGCGAGGTAGC
GCCCGGTATGGCTCTCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLRSAILALSICVALPASAATVAQFNSSVGVTVQTSAANTITESHGYQPGPSSIVTSGDFGLVTGDDNGTDTCCTGSLIN
TTNPVDLGEAALSATGSVNSVGSVFAEGERRALWSFSNVGPVTQSLILTFDIETAISQAIDPLVGGAAASGTEVRIERDG
VVIYNEGLDAVIEELALGTANSELFVYNFDLPSTGRTSTTFNVFVSGYVGVSSDPSEVMSPVPLPAGAVLLVAGLGALGA
LRRVTSRG

Sequences:

>Translated_248_residues
MLRSAILALSICVALPASAATVAQFNSSVGVTVQTSAANTITESHGYQPGPSSIVTSGDFGLVTGDDNGTDTCCTGSLIN
TTNPVDLGEAALSATGSVNSVGSVFAEGERRALWSFSNVGPVTQSLILTFDIETAISQAIDPLVGGAAASGTEVRIERDG
VVIYNEGLDAVIEELALGTANSELFVYNFDLPSTGRTSTTFNVFVSGYVGVSSDPSEVMSPVPLPAGAVLLVAGLGALGA
LRRVTSRG
>Mature_248_residues
MLRSAILALSICVALPASAATVAQFNSSVGVTVQTSAANTITESHGYQPGPSSIVTSGDFGLVTGDDNGTDTCCTGSLIN
TTNPVDLGEAALSATGSVNSVGSVFAEGERRALWSFSNVGPVTQSLILTFDIETAISQAIDPLVGGAAASGTEVRIERDG
VVIYNEGLDAVIEELALGTANSELFVYNFDLPSTGRTSTTFNVFVSGYVGVSSDPSEVMSPVPLPAGAVLLVAGLGALGA
LRRVTSRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25122; Mature: 25122

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSAILALSICVALPASAATVAQFNSSVGVTVQTSAANTITESHGYQPGPSSIVTSGDF
CCHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCCCHHHHHCCCCCCCCCEEECCCE
GLVTGDDNGTDTCCTGSLINTTNPVDLGEAALSATGSVNSVGSVFAEGERRALWSFSNVG
EEEECCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCC
PVTQSLILTFDIETAISQAIDPLVGGAAASGTEVRIERDGVVIYNEGLDAVIEELALGTA
HHCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHCCCC
NSELFVYNFDLPSTGRTSTTFNVFVSGYVGVSSDPSEVMSPVPLPAGAVLLVAGLGALGA
CCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHH
LRRVTSRG
HHHHHCCC
>Mature Secondary Structure
MLRSAILALSICVALPASAATVAQFNSSVGVTVQTSAANTITESHGYQPGPSSIVTSGDF
CCHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCCCHHHHHCCCCCCCCCEEECCCE
GLVTGDDNGTDTCCTGSLINTTNPVDLGEAALSATGSVNSVGSVFAEGERRALWSFSNVG
EEEECCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCC
PVTQSLILTFDIETAISQAIDPLVGGAAASGTEVRIERDGVVIYNEGLDAVIEELALGTA
HHCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHCCCC
NSELFVYNFDLPSTGRTSTTFNVFVSGYVGVSSDPSEVMSPVPLPAGAVLLVAGLGALGA
CCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHH
LRRVTSRG
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA