Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054178

Identifier: 89054178

GI number: 89054178

Start: 1670301

End: 1670591

Strand: Reverse

Name: 89054178

Synonym: Jann_1687

Alternate gene names: NA

Gene position: 1670591-1670301 (Counterclockwise)

Preceding gene: 89054179

Following gene: 89054173

Centisome position: 38.69

GC content: 52.92

Gene sequence:

>291_bases
ATGGCGCATTTTTATTTCACTGATCTCGATTTCATCTTAATCAGCCGGGCACTCGGCCTTATCGGGTTTGCCATCTATGT
TGTTGGTTTCTTTTTCCTTTCCGTTGGGCGATTGCACTCCTCCCAACCGATTTACTTCGTGATGGTTCTGGTGGCATCGA
CCTGCGTGCTGATCTCGCTCTGGGCTGATTTCAACCTGGCGGCGGCACTGATCCAGGGGTTCTACATGCTGATGTCCACC
GGCGGCATCATCGTCCGGCTCAAGCAGCGCAAAGCGATGAGCTTCGCCTAA

Upstream 100 bases:

>100_bases
CACGCTGCACCGCGGCGAAGGGTTTTCCGTACCTGACCCGACTTGCCGCTGCGTGCTACCCAGTTTCCACGGTCGCATTT
CCGGCCGCTGGGGAAGTCTC

Downstream 100 bases:

>100_bases
CGTCGGAAAATGGTCGGACGCAGACCGTCGCTGGCCGATTGCGCCACATCCGCGATCCGTCGCGCCCGGGTGGGCGCGGT
CTTTGCGGTCTTGATCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MAHFYFTDLDFILISRALGLIGFAIYVVGFFFLSVGRLHSSQPIYFVMVLVASTCVLISLWADFNLAAALIQGFYMLMST
GGIIVRLKQRKAMSFA

Sequences:

>Translated_96_residues
MAHFYFTDLDFILISRALGLIGFAIYVVGFFFLSVGRLHSSQPIYFVMVLVASTCVLISLWADFNLAAALIQGFYMLMST
GGIIVRLKQRKAMSFA
>Mature_95_residues
AHFYFTDLDFILISRALGLIGFAIYVVGFFFLSVGRLHSSQPIYFVMVLVASTCVLISLWADFNLAAALIQGFYMLMSTG
GIIVRLKQRKAMSFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10724; Mature: 10593

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHFYFTDLDFILISRALGLIGFAIYVVGFFFLSVGRLHSSQPIYFVMVLVASTCVLISL
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
WADFNLAAALIQGFYMLMSTGGIIVRLKQRKAMSFA
HCCHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCC
>Mature Secondary Structure 
AHFYFTDLDFILISRALGLIGFAIYVVGFFFLSVGRLHSSQPIYFVMVLVASTCVLISL
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
WADFNLAAALIQGFYMLMSTGGIIVRLKQRKAMSFA
HCCHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA