Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is yuxG [H]
Identifier: 89053886
GI number: 89053886
Start: 1364721
End: 1365683
Strand: Direct
Name: yuxG [H]
Synonym: Jann_1395
Alternate gene names: 89053886
Gene position: 1364721-1365683 (Clockwise)
Preceding gene: 89053885
Following gene: 89053887
Centisome position: 31.61
GC content: 64.38
Gene sequence:
>963_bases ATGATCGACCCGACCACCTTTAGCGCATTTCGCACCCTCTCGGCCCGGTTGGGTCAGGACCCGCTGCGGGTGCAGGGGCC GGGGGGGAACACGTCGATCAAGCAGGACGGGGTGATGTGGATCAAGGCGTCTGGCACGGAACTGGCCGATGCGGAGCGCG CTGACATCTTCGTGGCGGTGGACCGCGACGCCGCCAAATCGGAGGCCTATGGGGACGGCGACGGCAGCTGCAAAACGACG GTTCTGGACCCGGCAATCACCCTGCGCCCGTCTATTGAAACGACCTTTCACGCGGCCTTGGACTGGGCCGTTGTGGCCCA TACCCATTCCATCGCGGCGCTGACCCACGGCGTTTCACCGCAGGGGCGGACGGAGGCGGCTACGAAACTGGATGGGTTGC CCGTGGCCTTTGCTCCCTACGCCAAACCCGGTCTGCCCCTCACGCGCCAGATCCTGTCGAAGATCACGCCAGAAACCCGC GTGGTGGTCTTGGAGAACCACGGCTTGATCTGTTGTGGTGATACGGTCGAGGCCGTGGCCGAGATCACGGAGGAGGTGGA AACCCGCCTTGCCATGCCCGTGTTGCGTGGCGGTGAGACGCCGCGAGACCCTGCGCCAGAAGGGTTTTCCTGGGCGGCAG AGAGCTGGCTCGCCTGCGATCCCCTGTCGGCACAACGTGCCTTGGCGGGGTCTTACTACCCCGACCATGTCGTCTTTCTG GGGCCCGCTTTGCCGACGCAGGACCACAACGGTACGCCGTCCGCTATCATTCAGGCGGGCACAGGCGTTTTGCTGCGGGA TGGCGCGACGCCGTCCCAGACAGCAATGCTGACCTGCCTGGCCAACCTTTTGTCTCGTGTGCCCGATGCCTGGACGATGG AGCCGATTGGCGTGGAGGCAGAAGCGGAACTGCTCAACTGGGACGCCGAGAAATACCGCCAGGCTTTGGCTGCAAGATCA TGA
Upstream 100 bases:
>100_bases TTTGCGGATGGCGCTGACACTACACAGACCATCGCCGATCTTGCCGCCCTTGATGGCGCGCCGCTGCCCACCTATACCCT TGACCAATTGAGATAAATCC
Downstream 100 bases:
>100_bases AGGGCAGGGCATGACCGACCTTTCGCTTGGGATCGACCTGGGCACATCGGGCATCCGCTCGGCTGTGGTGAATGGCGCGG GAGAGGTCGTTTCTACCGCG
Product: class II aldolase/adducin-like protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MIDPTTFSAFRTLSARLGQDPLRVQGPGGNTSIKQDGVMWIKASGTELADAERADIFVAVDRDAAKSEAYGDGDGSCKTT VLDPAITLRPSIETTFHAALDWAVVAHTHSIAALTHGVSPQGRTEAATKLDGLPVAFAPYAKPGLPLTRQILSKITPETR VVVLENHGLICCGDTVEAVAEITEEVETRLAMPVLRGGETPRDPAPEGFSWAAESWLACDPLSAQRALAGSYYPDHVVFL GPALPTQDHNGTPSAIIQAGTGVLLRDGATPSQTAMLTCLANLLSRVPDAWTMEPIGVEAEAELLNWDAEKYRQALAARS
Sequences:
>Translated_320_residues MIDPTTFSAFRTLSARLGQDPLRVQGPGGNTSIKQDGVMWIKASGTELADAERADIFVAVDRDAAKSEAYGDGDGSCKTT VLDPAITLRPSIETTFHAALDWAVVAHTHSIAALTHGVSPQGRTEAATKLDGLPVAFAPYAKPGLPLTRQILSKITPETR VVVLENHGLICCGDTVEAVAEITEEVETRLAMPVLRGGETPRDPAPEGFSWAAESWLACDPLSAQRALAGSYYPDHVVFL GPALPTQDHNGTPSAIIQAGTGVLLRDGATPSQTAMLTCLANLLSRVPDAWTMEPIGVEAEAELLNWDAEKYRQALAARS >Mature_320_residues MIDPTTFSAFRTLSARLGQDPLRVQGPGGNTSIKQDGVMWIKASGTELADAERADIFVAVDRDAAKSEAYGDGDGSCKTT VLDPAITLRPSIETTFHAALDWAVVAHTHSIAALTHGVSPQGRTEAATKLDGLPVAFAPYAKPGLPLTRQILSKITPETR VVVLENHGLICCGDTVEAVAEITEEVETRLAMPVLRGGETPRDPAPEGFSWAAESWLACDPLSAQRALAGSYYPDHVVFL GPALPTQDHNGTPSAIIQAGTGVLLRDGATPSQTAMLTCLANLLSRVPDAWTMEPIGVEAEAELLNWDAEKYRQALAARS
Specific function: Unknown
COG id: COG3347
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 - InterPro: IPR013454 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short; PF00596 Aldolase_II [H]
EC number: NA
Molecular weight: Translated: 33961; Mature: 33961
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPTTFSAFRTLSARLGQDPLRVQGPGGNTSIKQDGVMWIKASGTELADAERADIFVAV CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEE DRDAAKSEAYGDGDGSCKTTVLDPAITLRPSIETTFHAALDWAVVAHTHSIAALTHGVSP CCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC QGRTEAATKLDGLPVAFAPYAKPGLPLTRQILSKITPETRVVVLENHGLICCGDTVEAVA CCCCHHHHHHCCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCEEEECHHHHHHH EITEEVETRLAMPVLRGGETPRDPAPEGFSWAAESWLACDPLSAQRALAGSYYPDHVVFL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEECCCCCHHHHHCCCCCCCEEEEE GPALPTQDHNGTPSAIIQAGTGVLLRDGATPSQTAMLTCLANLLSRVPDAWTMEPIGVEA CCCCCCCCCCCCCHHEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC EAELLNWDAEKYRQALAARS HHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MIDPTTFSAFRTLSARLGQDPLRVQGPGGNTSIKQDGVMWIKASGTELADAERADIFVAV CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEE DRDAAKSEAYGDGDGSCKTTVLDPAITLRPSIETTFHAALDWAVVAHTHSIAALTHGVSP CCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC QGRTEAATKLDGLPVAFAPYAKPGLPLTRQILSKITPETRVVVLENHGLICCGDTVEAVA CCCCHHHHHHCCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCEEEECHHHHHHH EITEEVETRLAMPVLRGGETPRDPAPEGFSWAAESWLACDPLSAQRALAGSYYPDHVVFL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEECCCCCHHHHHCCCCCCCEEEEE GPALPTQDHNGTPSAIIQAGTGVLLRDGATPSQTAMLTCLANLLSRVPDAWTMEPIGVEA CCCCCCCCCCCCCHHEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC EAELLNWDAEKYRQALAARS HHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377; 8188684 [H]