Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053804

Identifier: 89053804

GI number: 89053804

Start: 1275240

End: 1276130

Strand: Direct

Name: 89053804

Synonym: Jann_1313

Alternate gene names: NA

Gene position: 1275240-1276130 (Clockwise)

Preceding gene: 89053802

Following gene: 89053808

Centisome position: 29.53

GC content: 62.18

Gene sequence:

>891_bases
ATGAGGCCGATCAAGCAACACGGATCAAGATGCGCTTTGCGTATGGCGATGCTGTTGACGCTCGGGTTCGCGGCACTCAC
GCATCTGGCGGGCCCGGCCCATACGCAATCTGCCGACGGCCCCTATGGCTCGCGATTGGGACAGCAATACAGTGATCTTC
AGGCAGCCTGGGTGGCGCTGGGTCGGTTGCGGGACGACAGATACCCCGGCGACGCGCCGGTCGATGCGGGAACGCTATCG
CGGAATTTCACCGAGATCGCGCTGGGTCGCGAATACAACGGCGCCAATGGCGGCTGGCTGGTCCGGTGGCGGGATCCGAT
CCGCATGCATGTGGTCTTTGGCCCATCCGTACCTATAGCCGACCAAACTGCCGACAGGGCGATGATCGGGCGCTATGCGT
CGCGGCTGTCATCTATCACCGGACACGATATTCGCCTCACGCGGGAAAGGGTCAATTTCCTCGTTCTTGTGGTGGCTGAA
CCGGAACTGAGGGGGCTGCGCGGTTTTCTGCGCCAGCATGTGCCGGAGTTGAGCACCCGCGCGGTGAACATCATCACGCG
GATGCCGCAGGCTCATTTGTGCATGGTGATCACGCTGCCCCACGCGGCGCGGGATCAGGGCATCGCACGGGCCGTGGCCA
TTGTTCGCGCGGAACATCCGGCTTTGATGCGCCGGTCTTGCGTGGAGGAAGAGCTGGCCCAGGGGATGGGCCTGCCCAAT
GATCATCGCGGGGCGCGCCCGTCGATCTTCAACGATGATGAGGAATTCGGTGTCCTGACTGGCCACGATGAGCTGCTGTT
ACGGATGCTCTATGATCCCAGGTTGGCACCGGGCATGACATTGCATCAGATCAGCCCACTGTTGCCGCAGATCATAGGCG
ACCACCTGTAG

Upstream 100 bases:

>100_bases
AACTGGAATGGAGCGATCTGGAACACGAGGTTCCGTTTTTGAAACGGCCTGCGAGGGTGCGGTTGCACCCCGTGCCCGAA
GGGCGAACACGTGGGGACGG

Downstream 100 bases:

>100_bases
CCGGCATCGGTCAGGATCCGTGCCGTCTTAGGCCACCTTGGCGAATGGCCCGGTGCCGCCGACATCACCGATATGCGCGC
CGTTCAGGTAGAGGCCTGTC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MRPIKQHGSRCALRMAMLLTLGFAALTHLAGPAHTQSADGPYGSRLGQQYSDLQAAWVALGRLRDDRYPGDAPVDAGTLS
RNFTEIALGREYNGANGGWLVRWRDPIRMHVVFGPSVPIADQTADRAMIGRYASRLSSITGHDIRLTRERVNFLVLVVAE
PELRGLRGFLRQHVPELSTRAVNIITRMPQAHLCMVITLPHAARDQGIARAVAIVRAEHPALMRRSCVEEELAQGMGLPN
DHRGARPSIFNDDEEFGVLTGHDELLLRMLYDPRLAPGMTLHQISPLLPQIIGDHL

Sequences:

>Translated_296_residues
MRPIKQHGSRCALRMAMLLTLGFAALTHLAGPAHTQSADGPYGSRLGQQYSDLQAAWVALGRLRDDRYPGDAPVDAGTLS
RNFTEIALGREYNGANGGWLVRWRDPIRMHVVFGPSVPIADQTADRAMIGRYASRLSSITGHDIRLTRERVNFLVLVVAE
PELRGLRGFLRQHVPELSTRAVNIITRMPQAHLCMVITLPHAARDQGIARAVAIVRAEHPALMRRSCVEEELAQGMGLPN
DHRGARPSIFNDDEEFGVLTGHDELLLRMLYDPRLAPGMTLHQISPLLPQIIGDHL
>Mature_296_residues
MRPIKQHGSRCALRMAMLLTLGFAALTHLAGPAHTQSADGPYGSRLGQQYSDLQAAWVALGRLRDDRYPGDAPVDAGTLS
RNFTEIALGREYNGANGGWLVRWRDPIRMHVVFGPSVPIADQTADRAMIGRYASRLSSITGHDIRLTRERVNFLVLVVAE
PELRGLRGFLRQHVPELSTRAVNIITRMPQAHLCMVITLPHAARDQGIARAVAIVRAEHPALMRRSCVEEELAQGMGLPN
DHRGARPSIFNDDEEFGVLTGHDELLLRMLYDPRLAPGMTLHQISPLLPQIIGDHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32767; Mature: 32767

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPIKQHGSRCALRMAMLLTLGFAALTHLAGPAHTQSADGPYGSRLGQQYSDLQAAWVAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GRLRDDRYPGDAPVDAGTLSRNFTEIALGREYNGANGGWLVRWRDPIRMHVVFGPSVPIA
HHHHCCCCCCCCCCCCCHHCCCHHHHEECCCCCCCCCCEEEEECCCEEEEEEECCCCCCC
DQTADRAMIGRYASRLSSITGHDIRLTRERVNFLVLVVAEPELRGLRGFLRQHVPELSTR
CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHH
AVNIITRMPQAHLCMVITLPHAARDQGIARAVAIVRAEHPALMRRSCVEEELAQGMGLPN
HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
DHRGARPSIFNDDEEFGVLTGHDELLLRMLYDPRLAPGMTLHQISPLLPQIIGDHL
CCCCCCCCCCCCCHHCCEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRPIKQHGSRCALRMAMLLTLGFAALTHLAGPAHTQSADGPYGSRLGQQYSDLQAAWVAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GRLRDDRYPGDAPVDAGTLSRNFTEIALGREYNGANGGWLVRWRDPIRMHVVFGPSVPIA
HHHHCCCCCCCCCCCCCHHCCCHHHHEECCCCCCCCCCEEEEECCCEEEEEEECCCCCCC
DQTADRAMIGRYASRLSSITGHDIRLTRERVNFLVLVVAEPELRGLRGFLRQHVPELSTR
CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHH
AVNIITRMPQAHLCMVITLPHAARDQGIARAVAIVRAEHPALMRRSCVEEELAQGMGLPN
HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
DHRGARPSIFNDDEEFGVLTGHDELLLRMLYDPRLAPGMTLHQISPLLPQIIGDHL
CCCCCCCCCCCCCHHCCEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA