Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053683
Identifier: 89053683
GI number: 89053683
Start: 1151484
End: 1151930
Strand: Direct
Name: 89053683
Synonym: Jann_1192
Alternate gene names: NA
Gene position: 1151484-1151930 (Clockwise)
Preceding gene: 89053682
Following gene: 89053684
Centisome position: 26.67
GC content: 63.76
Gene sequence:
>447_bases ATGTATCACGCACCGCGAAAAGGCCTGCTGGCCGCGCTCGCCTTGATCGGGTCCCTTGTTGCGGCCGCGCCCTCGGGCGC GCTGACCATCGTCTTGCCGTCGGCCTGCGATGTGGCGCAATCCAGCGGGCAGGTTTTTCCGGCGGGCCAGGCACCGGGCC CCGCGCAACAGGTCTATGAGAGCCAGGTCGGCGAGGGTGTCGTGATGTGGGATTTCCGCACGACCGACGGCCGGGACGCG TCTGTGATCCGGATCTGCCAGTCGGGCCGCGAATTGCGGGTGATCTATAACACCACCAACGCCTATGACCGTCTGACGGA TATGGCGTTCGGGCCGCAGGGCTACACCTTGCCGCAAATCGCGAATGAGATGAATACCCTGGGCTCTGACACCCATCGCA CCAGAAATACCTACGGCTCCTGCGTCTGTGACGCTCTGGGGTACTAA
Upstream 100 bases:
>100_bases CCAACTGCCCGGTAGATTTCTAAGACGCCTGACACCGGGCCACACGAGCGGCGCAAGACCGCAAGAGACGCGAAGACAGA TGATGAAAGAGGGACAGACG
Downstream 100 bases:
>100_bases TTAAGGACGACGCCATGACCATTGGCTTGGAACATTACCTGACGGTGGCGGCGGCGCTGTTTGTCATTGGCATTTTCGGG ATCTTCCTGAACCGCAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MYHAPRKGLLAALALIGSLVAAAPSGALTIVLPSACDVAQSSGQVFPAGQAPGPAQQVYESQVGEGVVMWDFRTTDGRDA SVIRICQSGRELRVIYNTTNAYDRLTDMAFGPQGYTLPQIANEMNTLGSDTHRTRNTYGSCVCDALGY
Sequences:
>Translated_148_residues MYHAPRKGLLAALALIGSLVAAAPSGALTIVLPSACDVAQSSGQVFPAGQAPGPAQQVYESQVGEGVVMWDFRTTDGRDA SVIRICQSGRELRVIYNTTNAYDRLTDMAFGPQGYTLPQIANEMNTLGSDTHRTRNTYGSCVCDALGY >Mature_148_residues MYHAPRKGLLAALALIGSLVAAAPSGALTIVLPSACDVAQSSGQVFPAGQAPGPAQQVYESQVGEGVVMWDFRTTDGRDA SVIRICQSGRELRVIYNTTNAYDRLTDMAFGPQGYTLPQIANEMNTLGSDTHRTRNTYGSCVCDALGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15717; Mature: 15717
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHAPRKGLLAALALIGSLVAAAPSGALTIVLPSACDVAQSSGQVFPAGQAPGPAQQVYE CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCEEECCCCCCHHHHHHH SQVGEGVVMWDFRTTDGRDASVIRICQSGRELRVIYNTTNAYDRLTDMAFGPQGYTLPQI HHCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCHHHH ANEMNTLGSDTHRTRNTYGSCVCDALGY HHHHHHCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYHAPRKGLLAALALIGSLVAAAPSGALTIVLPSACDVAQSSGQVFPAGQAPGPAQQVYE CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCEEECCCCCCHHHHHHH SQVGEGVVMWDFRTTDGRDASVIRICQSGRELRVIYNTTNAYDRLTDMAFGPQGYTLPQI HHCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCHHHH ANEMNTLGSDTHRTRNTYGSCVCDALGY HHHHHHCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA