Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is nqo7 [H]

Identifier: 89053645

GI number: 89053645

Start: 1115977

End: 1116342

Strand: Direct

Name: nqo7 [H]

Synonym: Jann_1154

Alternate gene names: 89053645

Gene position: 1115977-1116342 (Clockwise)

Preceding gene: 89053642

Following gene: 89053646

Centisome position: 25.84

GC content: 58.74

Gene sequence:

>366_bases
ATGACCGAGCTTCTCACCGAATACGCCCCGATCCTGATCTTTCTGGGACTGGCCATTGGCCTGGCTTTGGTGCTGATCCT
CGCGGCGGTGGTGGTCGCAGTCAGCAACCCGGACCCCGAAAAGGTCAGCGCCTACGAATGCGGCTTCAATGCGTTCGATG
ATGCGCGGATGAAGTTCGATGTGCGCTTCTATCTGGTGGCGATCCTGTTCATCATCTTTGACCTGGAAATCGCCTTCCTG
TTCCCCTGGGCCACGGCCTTCCCGGGCCTCAGCGATCTGGCATTCTGGTCGATGATGGTGTTCCTGGGCGTGCTGACCAT
CGGCTTTGCCTATGAGTGGAAGAAGGGTGCGCTGGACTGGGAGTGA

Upstream 100 bases:

>100_bases
GGGCGCGGTCCATTTGCCCGACTTTGCCGCAGCCTGCGCCCGTTGACCGCTGCGCGGCTCCGGCGTAGACGGGAGCGGCA
TCACAATACCGGACGCGACC

Downstream 100 bases:

>100_bases
CCGGCGCAAGGCGGGGGCTGCTCAAGGTTGAGCACTTGTGCCAAGCGATTGAAAAGCCACATAAACTCTCTTTTTGTTAT
CAATATATTAACCCTTTCGG

Product: NADH dehydrogenase subunit A

Products: NA

Alternate protein names: NADH dehydrogenase I subunit 7; NDH-1 subunit 7 [H]

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTELLTEYAPILIFLGLAIGLALVLILAAVVVAVSNPDPEKVSAYECGFNAFDDARMKFDVRFYLVAILFIIFDLEIAFL
FPWATAFPGLSDLAFWSMMVFLGVLTIGFAYEWKKGALDWE

Sequences:

>Translated_121_residues
MTELLTEYAPILIFLGLAIGLALVLILAAVVVAVSNPDPEKVSAYECGFNAFDDARMKFDVRFYLVAILFIIFDLEIAFL
FPWATAFPGLSDLAFWSMMVFLGVLTIGFAYEWKKGALDWE
>Mature_120_residues
TELLTEYAPILIFLGLAIGLALVLILAAVVVAVSNPDPEKVSAYECGFNAFDDARMKFDVRFYLVAILFIIFDLEIAFLF
PWATAFPGLSDLAFWSMMVFLGVLTIGFAYEWKKGALDWE

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0838

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 3 (chain A)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788625, Length=119, Percent_Identity=32.7731092436975, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023043
- InterPro:   IPR000440 [H]

Pfam domain/function: PF00507 Oxidored_q4 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 13541; Mature: 13410

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELLTEYAPILIFLGLAIGLALVLILAAVVVAVSNPDPEKVSAYECGFNAFDDARMKFD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHH
VRFYLVAILFIIFDLEIAFLFPWATAFPGLSDLAFWSMMVFLGVLTIGFAYEWKKGALDW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
E
C
>Mature Secondary Structure 
TELLTEYAPILIFLGLAIGLALVLILAAVVVAVSNPDPEKVSAYECGFNAFDDARMKFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHH
VRFYLVAILFIIFDLEIAFLFPWATAFPGLSDLAFWSMMVFLGVLTIGFAYEWKKGALDW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1637825 [H]