Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89053637
Identifier: 89053637
GI number: 89053637
Start: 1107536
End: 1107991
Strand: Direct
Name: 89053637
Synonym: Jann_1146
Alternate gene names: NA
Gene position: 1107536-1107991 (Clockwise)
Preceding gene: 89053636
Following gene: 89053638
Centisome position: 25.65
GC content: 63.16
Gene sequence:
>456_bases ATGAGTTCTATTGGCCAAGATGAAGGGGGGAGCGGTGTGACCCTGACGGAGTTGAGAGCCAAGTATCCGGGCGCGGAAAC CAGTATTTTCGGCGACTCCGCAACGCTGTCAGCCGAGTTGCTGGCGCTGGTGCGCAAGGGCGTGAAACGCGCGACCTGCA CGGCGATGGCCGATGTTGCGTCCGGCGAAGATGCCATGCCCCAGATCGGACGCATCGATATCTTCACGACGTTTGACGGA CGGCCTGCATTGGCGACCCGGACCCTGGAGCTGCGGCTGGTGCGGTTCTGCGACATGACCGAAGAGATGGCGTTGGCCGA GGGGGAGGACGAAACCCTCGCCGGTTGGCAGGAAGGCCATGGGCGCTACTACCGGCGGCTGGGCATCTTCGCGCCGGACA TGGAGCTGATCTGGGAGCGGTTCGAGGTGGTGGAAGATCTGGGGGCGGTTGATTGA
Upstream 100 bases:
>100_bases CGCGCGAAGTCTTGGGGCTGTCGCTGGCGGCCGCGCTGAATGCCCCGATTGATGAGACGCGCTTTGGCGTCTTCCGTATG TGAGCGTGGGGGAGGTTGGA
Downstream 100 bases:
>100_bases GTTTCACGGCGATCATCCGAGAGGCTTTCGTACTTTCCGATGGCAAGATCGTTTTGGACATGAGCGAAATCGAAGGGATG CCGACGGTGGGTGATCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSSIGQDEGGSGVTLTELRAKYPGAETSIFGDSATLSAELLALVRKGVKRATCTAMADVASGEDAMPQIGRIDIFTTFDG RPALATRTLELRLVRFCDMTEEMALAEGEDETLAGWQEGHGRYYRRLGIFAPDMELIWERFEVVEDLGAVD
Sequences:
>Translated_151_residues MSSIGQDEGGSGVTLTELRAKYPGAETSIFGDSATLSAELLALVRKGVKRATCTAMADVASGEDAMPQIGRIDIFTTFDG RPALATRTLELRLVRFCDMTEEMALAEGEDETLAGWQEGHGRYYRRLGIFAPDMELIWERFEVVEDLGAVD >Mature_150_residues SSIGQDEGGSGVTLTELRAKYPGAETSIFGDSATLSAELLALVRKGVKRATCTAMADVASGEDAMPQIGRIDIFTTFDGR PALATRTLELRLVRFCDMTEEMALAEGEDETLAGWQEGHGRYYRRLGIFAPDMELIWERFEVVEDLGAVD
Specific function: Unknown
COG id: COG4405
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16484; Mature: 16353
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIGQDEGGSGVTLTELRAKYPGAETSIFGDSATLSAELLALVRKGVKRATCTAMADVA CCCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC SGEDAMPQIGRIDIFTTFDGRPALATRTLELRLVRFCDMTEEMALAEGEDETLAGWQEGH CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHCCHHHHH GRYYRRLGIFAPDMELIWERFEVVEDLGAVD HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSIGQDEGGSGVTLTELRAKYPGAETSIFGDSATLSAELLALVRKGVKRATCTAMADVA CCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC SGEDAMPQIGRIDIFTTFDGRPALATRTLELRLVRFCDMTEEMALAEGEDETLAGWQEGH CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHCCHHHHH GRYYRRLGIFAPDMELIWERFEVVEDLGAVD HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA