Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053443
Identifier: 89053443
GI number: 89053443
Start: 911105
End: 912052
Strand: Direct
Name: 89053443
Synonym: Jann_0952
Alternate gene names: NA
Gene position: 911105-912052 (Clockwise)
Preceding gene: 89053442
Following gene: 89053444
Centisome position: 21.1
GC content: 63.08
Gene sequence:
>948_bases ATGACATTTTCCAACCGCGGGGCAGTGGCCCTTTCCATCTTGGCGGCGTCATTCGTCGCCCCGGTTCACGCGCAAGACGG GGTGTTAAACGACCCGCCCGAACGCCTTGGCGTGACGCAAATCTTCACTAACGACTGGTACGGTATGCCGTTCGGCGACC GCTTTGATCGCTGGCGCACCGGGGGCTATCAGGTCAGCGGCTTCTGGGGCCGCGACGGGTGGGACGACTCCCTGCCATCC ACGCCGTTTGCGCTTATGGAATATCGGTTTCGCGGCGAGATCATTGCGCCCGATAACCTCTCCTCCCCCGCGCCAGGGGA TCGCCGGTATGCGCCCGCCCTCTATTTCGGGGCCGCGACCCATTTCGACTATCGCGGGATAGAGGTCTCTGCCGGGGCCG ATCTTGTGTTCACGGGCGATCAGACGGGTCTGATGGGTCTTCACGACAGCATCCACCAGACGTTTGGCGACTCGCCTGTG GATTTGAGCGACTTCATGATCGAAGACGGCATCTACCTGAATGCGACGGTTGAAACCGCGCGGTCATATGCGGTGGGCTC TGCCAGCGTGCGCCCCTTTGTGGAGGCTCAGGCCGGGGTGGAAACCCTGGTGCGCGCCGGTGCGGATCTGCGGTTTGGCA ATTACGATCCGGGCTCGCTCCTGATCCGGGAGGCCACGACCGGGCAACGGATTGTCGGCATTCCCGGCGACAGCGTTGGC GGGTGGAGCTTCTCGCTCGGTGCGGACGTGGCCTATGTCAGCGATAGCGTTCTGCTACCGGAAAACGGACCAGCGCCGGA GGACACGCGGTATCGCCTGCGTGGCGGGGTCGGCCACGGCTATGGTCCGGCGGATCTGTTCTACGGTGTGACGTATCTGT CTGAGGAATTTGAGGGCCAGAATGAGGGCCAGCTTGTCGGCACCCTGTCGCTGATGCTGCGCTTCTGA
Upstream 100 bases:
>100_bases TAATCGGATCGTTTCTCTGCGTGTTGCCCGCAATCGGTGCTAGAATCGCCACAAATCACCGGCAAAACCGCTGGAAAGAA AAAACATACGGGCAGCAGTC
Downstream 100 bases:
>100_bases GGCCGGGAAGACTCACCCGATGACAGTTTTGCGAATCACCCTCTTGCCCAAAGCGAATCACCTCTGCTAGCGTGCCCTCT AACGCTCGGGGATCAACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTFSNRGAVALSILAASFVAPVHAQDGVLNDPPERLGVTQIFTNDWYGMPFGDRFDRWRTGGYQVSGFWGRDGWDDSLPS TPFALMEYRFRGEIIAPDNLSSPAPGDRRYAPALYFGAATHFDYRGIEVSAGADLVFTGDQTGLMGLHDSIHQTFGDSPV DLSDFMIEDGIYLNATVETARSYAVGSASVRPFVEAQAGVETLVRAGADLRFGNYDPGSLLIREATTGQRIVGIPGDSVG GWSFSLGADVAYVSDSVLLPENGPAPEDTRYRLRGGVGHGYGPADLFYGVTYLSEEFEGQNEGQLVGTLSLMLRF
Sequences:
>Translated_315_residues MTFSNRGAVALSILAASFVAPVHAQDGVLNDPPERLGVTQIFTNDWYGMPFGDRFDRWRTGGYQVSGFWGRDGWDDSLPS TPFALMEYRFRGEIIAPDNLSSPAPGDRRYAPALYFGAATHFDYRGIEVSAGADLVFTGDQTGLMGLHDSIHQTFGDSPV DLSDFMIEDGIYLNATVETARSYAVGSASVRPFVEAQAGVETLVRAGADLRFGNYDPGSLLIREATTGQRIVGIPGDSVG GWSFSLGADVAYVSDSVLLPENGPAPEDTRYRLRGGVGHGYGPADLFYGVTYLSEEFEGQNEGQLVGTLSLMLRF >Mature_314_residues TFSNRGAVALSILAASFVAPVHAQDGVLNDPPERLGVTQIFTNDWYGMPFGDRFDRWRTGGYQVSGFWGRDGWDDSLPST PFALMEYRFRGEIIAPDNLSSPAPGDRRYAPALYFGAATHFDYRGIEVSAGADLVFTGDQTGLMGLHDSIHQTFGDSPVD LSDFMIEDGIYLNATVETARSYAVGSASVRPFVEAQAGVETLVRAGADLRFGNYDPGSLLIREATTGQRIVGIPGDSVGG WSFSLGADVAYVSDSVLLPENGPAPEDTRYRLRGGVGHGYGPADLFYGVTYLSEEFEGQNEGQLVGTLSLMLRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34042; Mature: 33911
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSNRGAVALSILAASFVAPVHAQDGVLNDPPERLGVTQIFTNDWYGMPFGDRFDRWRT CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHCC GGYQVSGFWGRDGWDDSLPSTPFALMEYRFRGEIIAPDNLSSPAPGDRRYAPALYFGAAT CCEEEEEEECCCCCCCCCCCCCHHHHHHEECCCEECCCCCCCCCCCCCCCCCEEEEECCC HFDYRGIEVSAGADLVFTGDQTGLMGLHDSIHQTFGDSPVDLSDFMIEDGIYLNATVETA CCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHEEECCEEEEEEHHHH RSYAVGSASVRPFVEAQAGVETLVRAGADLRFGNYDPGSLLIREATTGQRIVGIPGDSVG HHEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEECCCCCEEEECCCCCCC GWSFSLGADVAYVSDSVLLPENGPAPEDTRYRLRGGVGHGYGPADLFYGVTYLSEEFEGQ CEEEECCCCEEEECCCEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCC NEGQLVGTLSLMLRF CCCEEEEEEEEHHCC >Mature Secondary Structure TFSNRGAVALSILAASFVAPVHAQDGVLNDPPERLGVTQIFTNDWYGMPFGDRFDRWRT CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHCC GGYQVSGFWGRDGWDDSLPSTPFALMEYRFRGEIIAPDNLSSPAPGDRRYAPALYFGAAT CCEEEEEEECCCCCCCCCCCCCHHHHHHEECCCEECCCCCCCCCCCCCCCCCEEEEECCC HFDYRGIEVSAGADLVFTGDQTGLMGLHDSIHQTFGDSPVDLSDFMIEDGIYLNATVETA CCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHEEECCEEEEEEHHHH RSYAVGSASVRPFVEAQAGVETLVRAGADLRFGNYDPGSLLIREATTGQRIVGIPGDSVG HHEECCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEECCCCCEEEECCCCCCC GWSFSLGADVAYVSDSVLLPENGPAPEDTRYRLRGGVGHGYGPADLFYGVTYLSEEFEGQ CEEEECCCCEEEECCCEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCC NEGQLVGTLSLMLRF CCCEEEEEEEEHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA