Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053439
Identifier: 89053439
GI number: 89053439
Start: 906028
End: 907014
Strand: Direct
Name: 89053439
Synonym: Jann_0948
Alternate gene names: NA
Gene position: 906028-907014 (Clockwise)
Preceding gene: 89053438
Following gene: 89053442
Centisome position: 20.98
GC content: 59.37
Gene sequence:
>987_bases ATGATGAGACCTGCCATTTTGGCGGGAGTGCTTATGGCACTTCCCTCTGTCACTCTTGCTCAGGGCCTAACGCTCGACGG GGCCGTGACCCTCGGATACGGCTTCAGCACAATCGACGGCTTCGGCACTGACATCACACTCAACGGAGCCTCGCTCGACT TTGACGGTGACCTGCGGTTCAGCGATGAATTCAGCGTTGGCCTGGGGTTCGGCTTCGGCTCCTCTGACCTGTCGGTCACG GGCCTGCCCAATGACATCAACATCGATCTGCTGTCCCTGTCGGTCGAGCCCGAATATCGGTTCAGCAATGGCGCCTATGT CGGCGCCTACTACCGGATGGGCGATCTTGACCTGTCGCTGGTTTCGCCTGTCACGGTTGGCGTGGACACGTTCCAATACG GTATCTTTGGCGGTTATGACTTCGGTCAGGGCCATGTGGAGGCGTTCTACGGTCAATCCGATTTCACCGAAAACTCGCTG TTGGGTTTGGGTATCAGTACGGATGTCACCGATTACGGCGTTTCGGCCGCGTATCAGATGACGCCCGAGTTGGAGCTGTT CGGCAGCGTTCTGCGCACGGATATTGGCCTTGGACCGGCGGGCGACGTGCATGTCACCGCCTTCTCGCTGGGGGCAGAAT ATGACATCACGCCAGAACTAGCCGTCTATGGCGCTGTCGGACAGACGATCTTTGATCTCAGCGATATTGGGGCCCCGAGC GATATCACGGCCACCGGCCTGACCCTTGGCGCGTCCTATGACCTGACCTCTGCCGCGTCGATCCCGATGTATGTCAGCGC CGAATATTCGCGGACCAACCTGGATCTGTCAGCCATCGGTCTCGCGACTGATCCTACGGTGGATCGCTTTGCGCTGGGTC TGACGATCCCGATCGGCAATGGCTCAGGCTCTGCGTTGAACTCCAACACCCGCGTGGCCCGGGGCGAGTATCGCTCAGCG GTCGCGGCGGTGTTCAACTCCTTCTAA
Upstream 100 bases:
>100_bases CGGTGTCCCAAGCGTTAACCTTTTGTCATTCCAGCACCATCGGCCTTTTTTTCGCCGACACGACCAATTGTACGACATCA CCTATTTAAGGAAATTTACC
Downstream 100 bases:
>100_bases CGGCAATTCTTTGATCGGTTAACCTTCGCGAAAGACACCTTCCGCTAGGCTAACGTCATTGAGCTAAACGCTTTCAATAG TTTGTAATGAGTATCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MMRPAILAGVLMALPSVTLAQGLTLDGAVTLGYGFSTIDGFGTDITLNGASLDFDGDLRFSDEFSVGLGFGFGSSDLSVT GLPNDINIDLLSLSVEPEYRFSNGAYVGAYYRMGDLDLSLVSPVTVGVDTFQYGIFGGYDFGQGHVEAFYGQSDFTENSL LGLGISTDVTDYGVSAAYQMTPELELFGSVLRTDIGLGPAGDVHVTAFSLGAEYDITPELAVYGAVGQTIFDLSDIGAPS DITATGLTLGASYDLTSAASIPMYVSAEYSRTNLDLSAIGLATDPTVDRFALGLTIPIGNGSGSALNSNTRVARGEYRSA VAAVFNSF
Sequences:
>Translated_328_residues MMRPAILAGVLMALPSVTLAQGLTLDGAVTLGYGFSTIDGFGTDITLNGASLDFDGDLRFSDEFSVGLGFGFGSSDLSVT GLPNDINIDLLSLSVEPEYRFSNGAYVGAYYRMGDLDLSLVSPVTVGVDTFQYGIFGGYDFGQGHVEAFYGQSDFTENSL LGLGISTDVTDYGVSAAYQMTPELELFGSVLRTDIGLGPAGDVHVTAFSLGAEYDITPELAVYGAVGQTIFDLSDIGAPS DITATGLTLGASYDLTSAASIPMYVSAEYSRTNLDLSAIGLATDPTVDRFALGLTIPIGNGSGSALNSNTRVARGEYRSA VAAVFNSF >Mature_328_residues MMRPAILAGVLMALPSVTLAQGLTLDGAVTLGYGFSTIDGFGTDITLNGASLDFDGDLRFSDEFSVGLGFGFGSSDLSVT GLPNDINIDLLSLSVEPEYRFSNGAYVGAYYRMGDLDLSLVSPVTVGVDTFQYGIFGGYDFGQGHVEAFYGQSDFTENSL LGLGISTDVTDYGVSAAYQMTPELELFGSVLRTDIGLGPAGDVHVTAFSLGAEYDITPELAVYGAVGQTIFDLSDIGAPS DITATGLTLGASYDLTSAASIPMYVSAEYSRTNLDLSAIGLATDPTVDRFALGLTIPIGNGSGSALNSNTRVARGEYRSA VAAVFNSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34142; Mature: 34142
Theoretical pI: Translated: 3.64; Mature: 3.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRPAILAGVLMALPSVTLAQGLTLDGAVTLGYGFSTIDGFGTDITLNGASLDFDGDLRF CCCHHHHHHHHHHCCCHHHHCCCEECCEEEECCCCCCCCCCCCEEEECCCEECCCCCEEE SDEFSVGLGFGFGSSDLSVTGLPNDINIDLLSLSVEPEYRFSNGAYVGAYYRMGDLDLSL CCCCEEEEEECCCCCCEEEEECCCCCEEEEEEEEECCCEEECCCCEEEEEEEECCCCEEE VSPVTVGVDTFQYGIFGGYDFGQGHVEAFYGQSDFTENSLLGLGISTDVTDYGVSAAYQM ECCEEECCCCEEECEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEE TPELELFGSVLRTDIGLGPAGDVHVTAFSLGAEYDITPELAVYGAVGQTIFDLSDIGAPS CCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCCC DITATGLTLGASYDLTSAASIPMYVSAEYSRTNLDLSAIGLATDPTVDRFALGLTIPIGN CCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEEECC GSGSALNSNTRVARGEYRSAVAAVFNSF CCCCCCCCCCEEECCHHHHHHHHHHHCC >Mature Secondary Structure MMRPAILAGVLMALPSVTLAQGLTLDGAVTLGYGFSTIDGFGTDITLNGASLDFDGDLRF CCCHHHHHHHHHHCCCHHHHCCCEECCEEEECCCCCCCCCCCCEEEECCCEECCCCCEEE SDEFSVGLGFGFGSSDLSVTGLPNDINIDLLSLSVEPEYRFSNGAYVGAYYRMGDLDLSL CCCCEEEEEECCCCCCEEEEECCCCCEEEEEEEEECCCEEECCCCEEEEEEEECCCCEEE VSPVTVGVDTFQYGIFGGYDFGQGHVEAFYGQSDFTENSLLGLGISTDVTDYGVSAAYQM ECCEEECCCCEEECEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEE TPELELFGSVLRTDIGLGPAGDVHVTAFSLGAEYDITPELAVYGAVGQTIFDLSDIGAPS CCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCCC DITATGLTLGASYDLTSAASIPMYVSAEYSRTNLDLSAIGLATDPTVDRFALGLTIPIGN CCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEEECC GSGSALNSNTRVARGEYRSAVAAVFNSF CCCCCCCCCCEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA