Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053412

Identifier: 89053412

GI number: 89053412

Start: 878178

End: 878441

Strand: Direct

Name: 89053412

Synonym: Jann_0921

Alternate gene names: NA

Gene position: 878178-878441 (Clockwise)

Preceding gene: 89053410

Following gene: 89053418

Centisome position: 20.34

GC content: 57.95

Gene sequence:

>264_bases
ATGAAACTCACAGGTCTTTCCCTAACGGCCCTTACGCTGGTGCTTGCTGGCCCTGCTTTTGCCGCCGGCCACTGTGGTTC
CGAGATGACTACGGACGCTGACGGTGAATGCGTCATGGTCGAGACGACGGAAACCCCAATGACGATGACCGTCCCAAGCG
AAGACAATCCCGGCGAGACCACTGAAGTTGAAGTTGAAGCAACGACCGAGCCTGCGGACGACCCCGATGACGGCGCACCG
GCCGAAGCTCCTGAAATTCAATAA

Upstream 100 bases:

>100_bases
TGTGCCTCTCGATTTGCAAAAGTACATTGTCCTTCGCATACCTTCGACCTAAACTATAAATGAGCATGAAAATGCATCAA
ATCAAACTGAAGGATACACG

Downstream 100 bases:

>100_bases
ACTGATGACCAGGCGATAATCTGCTACACTATTGAGCGAAGGGCAGCCATGGCGGTATCGCTGTCGTTGCCCTTCTCCGC
AAAGACCCCAAGCGCATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKLTGLSLTALTLVLAGPAFAAGHCGSEMTTDADGECVMVETTETPMTMTVPSEDNPGETTEVEVEATTEPADDPDDGAP
AEAPEIQ

Sequences:

>Translated_87_residues
MKLTGLSLTALTLVLAGPAFAAGHCGSEMTTDADGECVMVETTETPMTMTVPSEDNPGETTEVEVEATTEPADDPDDGAP
AEAPEIQ
>Mature_87_residues
MKLTGLSLTALTLVLAGPAFAAGHCGSEMTTDADGECVMVETTETPMTMTVPSEDNPGETTEVEVEATTEPADDPDDGAP
AEAPEIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8912; Mature: 8912

Theoretical pI: Translated: 3.24; Mature: 3.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTGLSLTALTLVLAGPAFAAGHCGSEMTTDADGECVMVETTETPMTMTVPSEDNPGET
CCCCCCHHHHEEHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCC
TEVEVEATTEPADDPDDGAPAEAPEIQ
EEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLTGLSLTALTLVLAGPAFAAGHCGSEMTTDADGECVMVETTETPMTMTVPSEDNPGET
CCCCCCHHHHEEHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCC
TEVEVEATTEPADDPDDGAPAEAPEIQ
EEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA