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The map label for this gene is 89053386

Identifier: 89053386

GI number: 89053386

Start: 849123

End: 849806

Strand: Direct

Name: 89053386

Synonym: Jann_0895

Alternate gene names: NA

Gene position: 849123-849806 (Clockwise)

Preceding gene: 89053384

Following gene: 89053390

Centisome position: 19.66

GC content: 63.45

Gene sequence:

>684_bases
ATGGATCAGCAAAACGTGTCACCCTTCAACGCATTGCCGCCGGTGGTCATCGCCCTGGCGGTGGTGATTTTCGGGCTGGA
GATCATGTTCCAACTCGCCACGGCGGGGATGCTGGGCGGGCAGGGCGGCGTCGGCTGGCGGCTGGCGGCGATGCAGGATT
TCGCGGTTCTGAACGCGGTCTGGGACTGGATGATCGAGACCGGCCAGTTCCCGACCGAGCATCTGGTGCGGTTCATCGCG
TATCCGTTGATCCACGGCAGCTTTATCCACGCCGCGATGGTGGTGGTGTTCATCCTCGCCTTGGGAAAAATGGTGGCGGA
GGTCTATTCGGTGCTGGCCTTCCTTGCCGTATTCTGGGTCTCGGCGATCATGGGGGCCTTGGGGTTCGTGGTGATCCTCG
ACAGTGAGATGCCGTTGGTGGGCGGCTATCCCGGTGTCTACGGGCTGATCGGGGCGTTTACCTTCCTGATGTGGATGCGG
GCGGAGGCGCAGGGATCGGGGCAGATGCGCGCGTTCGGGCTGATCGGAGCACTTTTGGCGATCCAGCTGCTGTTTGGCCT
GCTGAACGGCGATTTCGGCAGTGTGGTCGCGGATTTCTCGGGGTTTGCGACGGGGTTGGCGCTGTCGTTCATCGTCAGCC
CGGGCGGCTGGCGGCGGATGCTGTCGCGGATGCGGCAACGCTGA

Upstream 100 bases:

>100_bases
CCATGACATCGATCCTTGGATTGCGCATGGCCCCACTGGCCAATCGGCGCGGTCGGGCTTACCCATGGGGGCAAGGATCG
TCAACCGAGGGCCCATGGGT

Downstream 100 bases:

>100_bases
GAGGCGCGTGTGGCGGCGGGTGTGCCCGTCAAGCAATGGTGGCGCCGGTGGACATTGTCGGAGCCTCCGGCGGGGATATT
TAGGGAACGGGGAAATTGGG

Product: rhomboid-like protein

Products: NA

Alternate protein names: Rhomboid-Like Protein; Peptidase

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MDQQNVSPFNALPPVVIALAVVIFGLEIMFQLATAGMLGGQGGVGWRLAAMQDFAVLNAVWDWMIETGQFPTEHLVRFIA
YPLIHGSFIHAAMVVVFILALGKMVAEVYSVLAFLAVFWVSAIMGALGFVVILDSEMPLVGGYPGVYGLIGAFTFLMWMR
AEAQGSGQMRAFGLIGALLAIQLLFGLLNGDFGSVVADFSGFATGLALSFIVSPGGWRRMLSRMRQR

Sequences:

>Translated_227_residues
MDQQNVSPFNALPPVVIALAVVIFGLEIMFQLATAGMLGGQGGVGWRLAAMQDFAVLNAVWDWMIETGQFPTEHLVRFIA
YPLIHGSFIHAAMVVVFILALGKMVAEVYSVLAFLAVFWVSAIMGALGFVVILDSEMPLVGGYPGVYGLIGAFTFLMWMR
AEAQGSGQMRAFGLIGALLAIQLLFGLLNGDFGSVVADFSGFATGLALSFIVSPGGWRRMLSRMRQR
>Mature_227_residues
MDQQNVSPFNALPPVVIALAVVIFGLEIMFQLATAGMLGGQGGVGWRLAAMQDFAVLNAVWDWMIETGQFPTEHLVRFIA
YPLIHGSFIHAAMVVVFILALGKMVAEVYSVLAFLAVFWVSAIMGALGFVVILDSEMPLVGGYPGVYGLIGAFTFLMWMR
AEAQGSGQMRAFGLIGALLAIQLLFGLLNGDFGSVVADFSGFATGLALSFIVSPGGWRRMLSRMRQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24458; Mature: 24458

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQQNVSPFNALPPVVIALAVVIFGLEIMFQLATAGMLGGQGGVGWRLAAMQDFAVLNAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
WDWMIETGQFPTEHLVRFIAYPLIHGSFIHAAMVVVFILALGKMVAEVYSVLAFLAVFWV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIMGALGFVVILDSEMPLVGGYPGVYGLIGAFTFLMWMRAEAQGSGQMRAFGLIGALLA
HHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IQLLFGLLNGDFGSVVADFSGFATGLALSFIVSPGGWRRMLSRMRQR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDQQNVSPFNALPPVVIALAVVIFGLEIMFQLATAGMLGGQGGVGWRLAAMQDFAVLNAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
WDWMIETGQFPTEHLVRFIAYPLIHGSFIHAAMVVVFILALGKMVAEVYSVLAFLAVFWV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIMGALGFVVILDSEMPLVGGYPGVYGLIGAFTFLMWMRAEAQGSGQMRAFGLIGALLA
HHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IQLLFGLLNGDFGSVVADFSGFATGLALSFIVSPGGWRRMLSRMRQR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA