Click here to switch to the map view.

The map label for this gene is atpF

Identifier: 89053261

GI number: 89053261

Start: 730253

End: 730825

Strand: Direct

Name: atpF

Synonym: Jann_0770

Alternate gene names: 89053261

Gene position: 730253-730825 (Clockwise)

Preceding gene: 89053260

Following gene: 89053262

Centisome position: 16.91

GC content: 65.79

Gene sequence:

>573_bases
ATGCGTTATTTGACCGCTCTGTTCGTTTTGGTTGCCTCCCCCGCGCTGGCTGCCGGGGACGATGCACCCAAGGGTCTGTT
CAACCCGTCGCTGGGCAACACGGACTTCGTCGTGCTGCTTGGCTTCCTGCTGTTCCTGGCGATCCTGTTTTACTTTGGCG
TCCCGAAGATGTTGGGCGGCATGTTGGATGCCCGCGCCGAAGGCATCCGGTCCGAGCTGGACGAGGCCCGCGCTCTGCGG
GAAGAGGCGCAGACACTTCTGGCCTCCTACGAGCGCAAGGCCCGCGAAGTGGAGGAGCAATCGGCCCGCATCGTGACCGA
GGCCCGCGCCAACGCCGAAACGGCCGCTGAACAGGCGAAGGCTGATATCGAGCGGTCGATCACCCGCCGCCTGGCCGCTG
CCGAAGATCAAATCGCCAGCGCCGAGGCGAAAGCCAGCCGCGCCGTGCGCGACACCGCAGCCTCCGTCGCCGTGGCCGCC
GCCGCCGAAGTCATCGCCGGAGGCACCAGCGCCACGGATCAGAACAAGATGATCGACGAGGCGATTGAAGAGGTCGGGCG
TCAGCTGCACTGA

Upstream 100 bases:

>100_bases
GATGTCGCAACCGAGATTGTCCGCGCCTTCGGGCCGGGTCAGGATGTGGATGCAGCGGCTGTCGCCGATGCCGTCGCGAA
CCGAGTGAGAGGGTAGATCC

Downstream 100 bases:

>100_bases
TCGGCCCAAAACACACGACACGCCAAGACCCCCGATGCCTGACAGCGCCGGGGGTCTTTTCGTCTCTGGCGGCAGCCCTT
GGTATTGCCTGCGCCAACCC

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRYLTALFVLVASPALAAGDDAPKGLFNPSLGNTDFVVLLGFLLFLAILFYFGVPKMLGGMLDARAEGIRSELDEARALR
EEAQTLLASYERKAREVEEQSARIVTEARANAETAAEQAKADIERSITRRLAAAEDQIASAEAKASRAVRDTAASVAVAA
AAEVIAGGTSATDQNKMIDEAIEEVGRQLH

Sequences:

>Translated_190_residues
MRYLTALFVLVASPALAAGDDAPKGLFNPSLGNTDFVVLLGFLLFLAILFYFGVPKMLGGMLDARAEGIRSELDEARALR
EEAQTLLASYERKAREVEEQSARIVTEARANAETAAEQAKADIERSITRRLAAAEDQIASAEAKASRAVRDTAASVAVAA
AAEVIAGGTSATDQNKMIDEAIEEVGRQLH
>Mature_190_residues
MRYLTALFVLVASPALAAGDDAPKGLFNPSLGNTDFVVLLGFLLFLAILFYFGVPKMLGGMLDARAEGIRSELDEARALR
EEAQTLLASYERKAREVEEQSARIVTEARANAETAAEQAKADIERSITRRLAAAEDQIASAEAKASRAVRDTAASVAVAA
AAEVIAGGTSATDQNKMIDEAIEEVGRQLH

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_JANSC (Q28UC5)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_508712.1
- STRING:   Q28UC5
- GeneID:   3933213
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_0770
- eggNOG:   NOG136808
- HOGENOM:   HBG692690
- OMA:   KTEEFVA
- ProtClustDB:   PRK13455
- BioCyc:   JSP290400:JANN_0770-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 20252; Mature: 20252

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd8e8520)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLTALFVLVASPALAAGDDAPKGLFNPSLGNTDFVVLLGFLLFLAILFYFGVPKMLGG
CHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH
MLDARAEGIRSELDEARALREEAQTLLASYERKAREVEEQSARIVTEARANAETAAEQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADIERSITRRLAAAEDQIASAEAKASRAVRDTAASVAVAAAAEVIAGGTSATDQNKMIDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AIEEVGRQLH
HHHHHHHHCH
>Mature Secondary Structure
MRYLTALFVLVASPALAAGDDAPKGLFNPSLGNTDFVVLLGFLLFLAILFYFGVPKMLGG
CHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH
MLDARAEGIRSELDEARALREEAQTLLASYERKAREVEEQSARIVTEARANAETAAEQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADIERSITRRLAAAEDQIASAEAKASRAVRDTAASVAVAAAAEVIAGGTSATDQNKMIDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AIEEVGRQLH
HHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA