Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is yyaM [H]
Identifier: 89053253
GI number: 89053253
Start: 725141
End: 726028
Strand: Direct
Name: yyaM [H]
Synonym: Jann_0762
Alternate gene names: 89053253
Gene position: 725141-726028 (Clockwise)
Preceding gene: 89053252
Following gene: 89053254
Centisome position: 16.79
GC content: 66.1
Gene sequence:
>888_bases ATGAGGGAGGCCGTGGGATCCACATGGGGTGGCCATCTGGCGATGCTGGCATTCTCGGCGCTGGTGGCGGGATCGTTTTC GCTTGGCGGGCAGGTGGCCAATGAACTGGCACCCACCGCATTGAACGCCGTGCGGTTTTCCATTGCCGCTGTGATCATGG GGGCGGTGGTGTATGCGCGGGGCGGGGTTCCCAAGGCCGCGCTGACCGCCCCGTGGCGATATCTGGTTCTGGGCGGCATC TTCGCCTTCTACTTCGTGCTGATGTTTGAGGGGTTGAAGACCGCGCCCCCGGTGTCCGCCGCCGCCGTGTTCACGCTGAC GCCGGTGATGAGCGCCTTGTTTGGCTGGATCTTGCTGCGCCAGGTCGTCAGCGCGCGGATAGCTGCGGCACTGGCGATCG GGGCCGTGGGCGCGGGCTGGGTGATCTTCCGCGCCGATCTTGCCGCGGTTCTGGCGTTTGAGGTCGGGCGCGGCGAGGTG ATCTATTTCATCGGGTGCATGGGGCACGCGCTCTACACGCCGCTGGTGCGGGTTTTGAACCGGGGCGAGCCGGTTCTGGT CTTCTCCTTCCTGACGTTGGTGGCCTGCGCGGGCGTGATCACCATCTGGGGGGCCGGAGAGATCGCGGCCGCCGATTGGG GCGCGCTCAGGCCGATGGTCTGGATCGCCATTGGCTACACCGCCCTCTTCGCCAGTGCGGCCACGGTCTTCCTGATCCAG TTCGCGTCCCTGCGCCTGCCATCGTCCAAGGTCATGGCCTACACCTATCTGACGCCATCGTGGGTGATCGGGTGGGAGAT CGCCCTGGGCCAACCGGTTCCCGCGGCGCTGGTATTGGGCGGGGTCGGGCTGACGGTGCTGGCCCTTGGATTGTTGCTGA AGGATTGA
Upstream 100 bases:
>100_bases TGCGCCTGGTTGAGAGGGTGCGCCTTGGGGGGCCAGCCCCCCAGACCCCCCGAAGTTGTAAAGCCCAGATGAAAAGGGAG CGGCGCGCTTTGGGGCGGGC
Downstream 100 bases:
>100_bases GGTCGATCAACGCGGCGATGGCCGTCTGCGCGTAAACTGGCGGGGAAAGGGGGGCACAATGCCAGCTGCAACCAACCGCG AAGATTTACTGCGTGTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MREAVGSTWGGHLAMLAFSALVAGSFSLGGQVANELAPTALNAVRFSIAAVIMGAVVYARGGVPKAALTAPWRYLVLGGI FAFYFVLMFEGLKTAPPVSAAAVFTLTPVMSALFGWILLRQVVSARIAAALAIGAVGAGWVIFRADLAAVLAFEVGRGEV IYFIGCMGHALYTPLVRVLNRGEPVLVFSFLTLVACAGVITIWGAGEIAAADWGALRPMVWIAIGYTALFASAATVFLIQ FASLRLPSSKVMAYTYLTPSWVIGWEIALGQPVPAALVLGGVGLTVLALGLLLKD
Sequences:
>Translated_295_residues MREAVGSTWGGHLAMLAFSALVAGSFSLGGQVANELAPTALNAVRFSIAAVIMGAVVYARGGVPKAALTAPWRYLVLGGI FAFYFVLMFEGLKTAPPVSAAAVFTLTPVMSALFGWILLRQVVSARIAAALAIGAVGAGWVIFRADLAAVLAFEVGRGEV IYFIGCMGHALYTPLVRVLNRGEPVLVFSFLTLVACAGVITIWGAGEIAAADWGALRPMVWIAIGYTALFASAATVFLIQ FASLRLPSSKVMAYTYLTPSWVIGWEIALGQPVPAALVLGGVGLTVLALGLLLKD >Mature_295_residues MREAVGSTWGGHLAMLAFSALVAGSFSLGGQVANELAPTALNAVRFSIAAVIMGAVVYARGGVPKAALTAPWRYLVLGGI FAFYFVLMFEGLKTAPPVSAAAVFTLTPVMSALFGWILLRQVVSARIAAALAIGAVGAGWVIFRADLAAVLAFEVGRGEV IYFIGCMGHALYTPLVRVLNRGEPVLVFSFLTLVACAGVITIWGAGEIAAADWGALRPMVWIAIGYTALFASAATVFLIQ FASLRLPSSKVMAYTYLTPSWVIGWEIALGQPVPAALVLGGVGLTVLALGLLLKD
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30778; Mature: 30778
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREAVGSTWGGHLAMLAFSALVAGSFSLGGQVANELAPTALNAVRFSIAAVIMGAVVYAR CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGVPKAALTAPWRYLVLGGIFAFYFVLMFEGLKTAPPVSAAAVFTLTPVMSALFGWILLR CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVVSARIAAALAIGAVGAGWVIFRADLAAVLAFEVGRGEVIYFIGCMGHALYTPLVRVLN HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHC RGEPVLVFSFLTLVACAGVITIWGAGEIAAADWGALRPMVWIAIGYTALFASAATVFLIQ CCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FASLRLPSSKVMAYTYLTPSWVIGWEIALGQPVPAALVLGGVGLTVLALGLLLKD HHHHCCCCCCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MREAVGSTWGGHLAMLAFSALVAGSFSLGGQVANELAPTALNAVRFSIAAVIMGAVVYAR CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGVPKAALTAPWRYLVLGGIFAFYFVLMFEGLKTAPPVSAAAVFTLTPVMSALFGWILLR CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVVSARIAAALAIGAVGAGWVIFRADLAAVLAFEVGRGEVIYFIGCMGHALYTPLVRVLN HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHC RGEPVLVFSFLTLVACAGVITIWGAGEIAAADWGALRPMVWIAIGYTALFASAATVFLIQ CCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FASLRLPSSKVMAYTYLTPSWVIGWEIALGQPVPAALVLGGVGLTVLALGLLLKD HHHHCCCCCCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]