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The map label for this gene is yadH [H]

Identifier: 89053238

GI number: 89053238

Start: 715271

End: 716032

Strand: Direct

Name: yadH [H]

Synonym: Jann_0747

Alternate gene names: 89053238

Gene position: 715271-716032 (Clockwise)

Preceding gene: 89053237

Following gene: 89053252

Centisome position: 16.56

GC content: 56.04

Gene sequence:

>762_bases
ATGAACCTGCAAGCGGTCCGCGCGATCTACATCTTTGAAATGGCGCGCACCTTCCGCACGATTGCGCAGTCCATTATCTC
TCCGGTGTTGTCGACATCGTTGTATTTTATCGTATTCGGGACGGCGATTGGCTCGCGCATTGATCAGGTGGAAGGCGTCA
GCTATGGCGCGTTCATTGTCCCGGGCCTGATCATGTTGACAGTGCTGACGCAGAGCATTTCCAACGCGAGTTTCGGGATC
TACTTCCCGAAGTTCATCGGCACCATCTATGAATTACTGTCCGCACCTGCGAGCTTTCTGGAGATCACGGCGGGCTATGT
GCTGGCGGCGGCGACGAAGAGTTTCATCATCGGTTTGATCATCCTTGGGACGGCGTTCTTTTTCGTCGATCTTCAGATCC
TGCACCCGGTATGGATGCTGACGTTTTTGGTCCTGACCTGCCTGTCGTTCAGCCTGTTTGGCTTCATCATCGGCATCTGG
GCGCAAAATTTCGAGCAATTGCAGTTGATCCCGCTACTAGCCGTGACGCCCTTGGTGTTTCTGGGCGGGGCGTTCTATTC
GATCTCGATGCTGCCGGAAAGCTGGCAGACGGTGACGCTGTTCAACCCGGTCGTCTATCTGATCTCCGGCTTTCGGTGGA
GCTTCTTTGGGGTGGCCGATGTGGCGCTGGGGTGGTCGATTGTTGCGATCCTTGGGTTTACGGGGACCTGCATCGCGGTG
ATAGGCTGGATCTTTCGAACCGGCTGGCGCATCCGCGCCTGA

Upstream 100 bases:

>100_bases
CGGCGTTGCAGGCCGAGGGGCTGATCGTCGCCGATGTGGAAACCAAACAGAGCAGCCTGGAGGAGATCTTCGTAGGCCTC
GTGCACGAGGGAGAGCAGCC

Downstream 100 bases:

>100_bases
GGGATTGCGCCCCTGTTCATGCCCCTTGCGGGGCGTGGACGAGGTCGCCGGGGGCCTCGCGCGCCTGCGGCGCGCTCGGC
GGGCGTCCGGTTTGCCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNLQAVRAIYIFEMARTFRTIAQSIISPVLSTSLYFIVFGTAIGSRIDQVEGVSYGAFIVPGLIMLTVLTQSISNASFGI
YFPKFIGTIYELLSAPASFLEITAGYVLAAATKSFIIGLIILGTAFFFVDLQILHPVWMLTFLVLTCLSFSLFGFIIGIW
AQNFEQLQLIPLLAVTPLVFLGGAFYSISMLPESWQTVTLFNPVVYLISGFRWSFFGVADVALGWSIVAILGFTGTCIAV
IGWIFRTGWRIRA

Sequences:

>Translated_253_residues
MNLQAVRAIYIFEMARTFRTIAQSIISPVLSTSLYFIVFGTAIGSRIDQVEGVSYGAFIVPGLIMLTVLTQSISNASFGI
YFPKFIGTIYELLSAPASFLEITAGYVLAAATKSFIIGLIILGTAFFFVDLQILHPVWMLTFLVLTCLSFSLFGFIIGIW
AQNFEQLQLIPLLAVTPLVFLGGAFYSISMLPESWQTVTLFNPVVYLISGFRWSFFGVADVALGWSIVAILGFTGTCIAV
IGWIFRTGWRIRA
>Mature_253_residues
MNLQAVRAIYIFEMARTFRTIAQSIISPVLSTSLYFIVFGTAIGSRIDQVEGVSYGAFIVPGLIMLTVLTQSISNASFGI
YFPKFIGTIYELLSAPASFLEITAGYVLAAATKSFIIGLIILGTAFFFVDLQILHPVWMLTFLVLTCLSFSLFGFIIGIW
AQNFEQLQLIPLLAVTPLVFLGGAFYSISMLPESWQTVTLFNPVVYLISGFRWSFFGVADVALGWSIVAILGFTGTCIAV
IGWIFRTGWRIRA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=241, Percent_Identity=40.6639004149378, Blast_Score=179, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27884; Mature: 27884

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]