Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053224
Identifier: 89053224
GI number: 89053224
Start: 702865
End: 703893
Strand: Direct
Name: 89053224
Synonym: Jann_0733
Alternate gene names: NA
Gene position: 702865-703893 (Clockwise)
Preceding gene: 89053222
Following gene: 89053225
Centisome position: 16.28
GC content: 63.56
Gene sequence:
>1029_bases ATGCCCCACGTTTCGCCAATCATCGCCGGCGCTTTGCTGGCCTCTGTGACCTTTGCATCAGCCGTTCTTGCCGACGGTCC CACGCAAACCGGCATGACCCAACTGCGCATCGCAGATGCCTCCCGGCCCCTGGAGGGGTTCCTGTGGTATCCGACCCAGG ATACATCGAACCCCGTTCGCGCCCATGGCAACGCGGTGTGGGAGGCCATTCGCGTGGTCCCAGACGCCGCCCCGGCAGAC GGCGCGCGCCCGCTGGTTGTCCTGTCCCATGGCATGTACGGCAACGCCCGTAATCAGGCGTGGTTGGCGGCAGAGCTGAC GGCGCAGGGCTATATCGTGGCCGCCGTCGACCATCCCGGCACCTCCACCTTCAGCCGCGATCCCGATGACGCGCGGGAGT TGTGGGAGCGTCCCCATGACATCAGCCGGACCATCGACCACGTGCTGGCGATGGAGGATTTGCAGATTGATGAAGATCGG ATCTACATGGCCGGGCATTCATTGGGCGGATGGACCGCCATGATGCTGGCGGGGGGCCGATACGACACCGCCCGCGCCGA TGGCTACTGCGAGGCCAATCCCGACGACTTGGTTTGTGGTATCTTCCAGATGTGGCAGGTGGGGATGGCCGAGGCGGACC GGCACATCATCACCCGGGATTGGTCGGATCCCCGATTATCCGCCGTGGCCGTGTTCGATCTGGGCGGAACGCAGACCTTC TCGGATCAAAGCCTCGCGAGCATCAACACACCGCTGATCGTCTTCGGCGCACCGATTGCGAATTCCGGAATAGATCTGGA GGTGGAGAGCCGCGCGTTGATCGCGGCCTTGCCCGACGGCACGCCGTATATCGAGCCTGCCGACCTCGCGCATTTCGATT TCCTGGGCCGCTGCACGGAGCAGGCCCACGCCATCCTGATGGAGGAGAATCCTAGCGATGTCATGGTGTGCGAGAACGGA GGCGCAGACCGTGCGGCCGACCATGCGATGATCGCCGCTGAGGTGATTGCTTTTTTTGAGGCGAACTGA
Upstream 100 bases:
>100_bases GCCTGTCCTGCAACGCGATCCAGGACGCTCAACCTATTGGTTCGCATTCATTTTTGCCTGACATCAGGGTCATCACCCAT ATTCAGATGGAGACTATCCA
Downstream 100 bases:
>100_bases GGCCCGTCCGACGTTTGACCGATCAAGACCCGCCATGCGTTCAGCGTGCGGCGGGTCTTTTGTCTCGGGCGCGCGGGCCA TTAATCGCTGGCCTGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MPHVSPIIAGALLASVTFASAVLADGPTQTGMTQLRIADASRPLEGFLWYPTQDTSNPVRAHGNAVWEAIRVVPDAAPAD GARPLVVLSHGMYGNARNQAWLAAELTAQGYIVAAVDHPGTSTFSRDPDDARELWERPHDISRTIDHVLAMEDLQIDEDR IYMAGHSLGGWTAMMLAGGRYDTARADGYCEANPDDLVCGIFQMWQVGMAEADRHIITRDWSDPRLSAVAVFDLGGTQTF SDQSLASINTPLIVFGAPIANSGIDLEVESRALIAALPDGTPYIEPADLAHFDFLGRCTEQAHAILMEENPSDVMVCENG GADRAADHAMIAAEVIAFFEAN
Sequences:
>Translated_342_residues MPHVSPIIAGALLASVTFASAVLADGPTQTGMTQLRIADASRPLEGFLWYPTQDTSNPVRAHGNAVWEAIRVVPDAAPAD GARPLVVLSHGMYGNARNQAWLAAELTAQGYIVAAVDHPGTSTFSRDPDDARELWERPHDISRTIDHVLAMEDLQIDEDR IYMAGHSLGGWTAMMLAGGRYDTARADGYCEANPDDLVCGIFQMWQVGMAEADRHIITRDWSDPRLSAVAVFDLGGTQTF SDQSLASINTPLIVFGAPIANSGIDLEVESRALIAALPDGTPYIEPADLAHFDFLGRCTEQAHAILMEENPSDVMVCENG GADRAADHAMIAAEVIAFFEAN >Mature_341_residues PHVSPIIAGALLASVTFASAVLADGPTQTGMTQLRIADASRPLEGFLWYPTQDTSNPVRAHGNAVWEAIRVVPDAAPADG ARPLVVLSHGMYGNARNQAWLAAELTAQGYIVAAVDHPGTSTFSRDPDDARELWERPHDISRTIDHVLAMEDLQIDEDRI YMAGHSLGGWTAMMLAGGRYDTARADGYCEANPDDLVCGIFQMWQVGMAEADRHIITRDWSDPRLSAVAVFDLGGTQTFS DQSLASINTPLIVFGAPIANSGIDLEVESRALIAALPDGTPYIEPADLAHFDFLGRCTEQAHAILMEENPSDVMVCENGG ADRAADHAMIAAEVIAFFEAN
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36783; Mature: 36651
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHVSPIIAGALLASVTFASAVLADGPTQTGMTQLRIADASRPLEGFLWYPTQDTSNPVR CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHH AHGNAVWEAIRVVPDAAPADGARPLVVLSHGMYGNARNQAWLAAELTAQGYIVAAVDHPG HCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCC TSTFSRDPDDARELWERPHDISRTIDHVLAMEDLQIDEDRIYMAGHSLGGWTAMMLAGGR CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCEECCCEEEEECCCCCCEEEEEEECCC YDTARADGYCEANPDDLVCGIFQMWQVGMAEADRHIITRDWSDPRLSAVAVFDLGGTQTF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCC SDQSLASINTPLIVFGAPIANSGIDLEVESRALIAALPDGTPYIEPADLAHFDFLGRCTE CCCCHHHCCCCEEEEECCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH QAHAILMEENPSDVMVCENGGADRAADHAMIAAEVIAFFEAN HHEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PHVSPIIAGALLASVTFASAVLADGPTQTGMTQLRIADASRPLEGFLWYPTQDTSNPVR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHH AHGNAVWEAIRVVPDAAPADGARPLVVLSHGMYGNARNQAWLAAELTAQGYIVAAVDHPG HCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCC TSTFSRDPDDARELWERPHDISRTIDHVLAMEDLQIDEDRIYMAGHSLGGWTAMMLAGGR CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCEECCCEEEEECCCCCCEEEEEEECCC YDTARADGYCEANPDDLVCGIFQMWQVGMAEADRHIITRDWSDPRLSAVAVFDLGGTQTF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCC SDQSLASINTPLIVFGAPIANSGIDLEVESRALIAALPDGTPYIEPADLAHFDFLGRCTE CCCCHHHCCCCEEEEECCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH QAHAILMEENPSDVMVCENGGADRAADHAMIAAEVIAFFEAN HHEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA