Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
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Accession | NC_007799 |
Length | 1,176,248 |
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The map label for this gene is 88658648
Identifier: 88658648
GI number: 88658648
Start: 1075174
End: 1075530
Strand: Reverse
Name: 88658648
Synonym: ECH_1044
Alternate gene names: NA
Gene position: 1075530-1075174 (Counterclockwise)
Preceding gene: 88657992
Following gene: 88658403
Centisome position: 91.44
GC content: 33.33
Gene sequence:
>357_bases ATGTTAAAGGCTGTTTTTGTATTTCTTGTAATTGTGGGATTTATAGGTGTTATGTCATTAAACTTTTCTAGTGCTGCAGC AAATAATAATAGTAGTACTAGCACGGTTAGTCAGGATGATGATGTGAGTAAAGTTATATGTAATGTTATAAAGTTTGTGC AAAAGTTAGGATTGCCAATCATGACAGGGGTAATCCTTGGTTCAAGTATTATGGCAATATTTGGAAGGTTGCCATGGCCA GCAATAGTGATGTTAGTTGTATTCACAGCAATATTTTTTGGTGCAGGTAAATTGGTTAGTAAGTTTGTTAATGGAGTTAG TAATAATATGACTAGTGGAGCAGATTGTACTAAATAA
Upstream 100 bases:
>100_bases CTTACTGAACATGTGTGATTGGTAATGTATTACTAGTTGAAGGTATGTCATATATAGAATTGTTCAGGTGTTTCGAAAAT TCATGTAAGGTATAAGTTAT
Downstream 100 bases:
>100_bases TCATCGTGAGAGCCTTTATGTTAAAGATTGTTTTAGTGTTTTTATAATAGTAGGTTTGTTGGCGTTGCACTGTTGTGTTA TTCAGGTGCACATGCTAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MLKAVFVFLVIVGFIGVMSLNFSSAAANNNSSTSTVSQDDDVSKVICNVIKFVQKLGLPIMTGVILGSSIMAIFGRLPWP AIVMLVVFTAIFFGAGKLVSKFVNGVSNNMTSGADCTK
Sequences:
>Translated_118_residues MLKAVFVFLVIVGFIGVMSLNFSSAAANNNSSTSTVSQDDDVSKVICNVIKFVQKLGLPIMTGVILGSSIMAIFGRLPWP AIVMLVVFTAIFFGAGKLVSKFVNGVSNNMTSGADCTK >Mature_118_residues MLKAVFVFLVIVGFIGVMSLNFSSAAANNNSSTSTVSQDDDVSKVICNVIKFVQKLGLPIMTGVILGSSIMAIFGRLPWP AIVMLVVFTAIFFGAGKLVSKFVNGVSNNMTSGADCTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12428; Mature: 12428
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKAVFVFLVIVGFIGVMSLNFSSAAANNNSSTSTVSQDDDVSKVICNVIKFVQKLGLPI CHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHH MTGVILGSSIMAIFGRLPWPAIVMLVVFTAIFFGAGKLVSKFVNGVSNNMTSGADCTK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLKAVFVFLVIVGFIGVMSLNFSSAAANNNSSTSTVSQDDDVSKVICNVIKFVQKLGLPI CHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHH MTGVILGSSIMAIFGRLPWPAIVMLVVFTAIFFGAGKLVSKFVNGVSNNMTSGADCTK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA