| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658634
Identifier: 88658634
GI number: 88658634
Start: 751744
End: 752217
Strand: Direct
Name: 88658634
Synonym: ECH_0744
Alternate gene names: NA
Gene position: 751744-752217 (Clockwise)
Preceding gene: 88658154
Following gene: 88658007
Centisome position: 63.91
GC content: 29.54
Gene sequence:
>474_bases ATGAGTAACGTAATAGATTATCAAAAGCTTATGCATGCTGCTATGTGTAGTGTAGTCAAAAACGCTTTAACTGTTGTGGC ACAATCAGAACATTTTTACAATGTACATATTGCTATATCCTTTTTAACACATTATAAAGGAGTAACACTACCTGAGCATG TAAAAAACAACTATCCACAAGAAATTACTGTAATATTACAACATCAATTTAGAAGCTTACAAGTATTTGATAACAGTGCT AGTGTAGTATTAAGTTTTAGAGGAAAAGAAGAAACAGTTGTTATTCCATACCAGTCTATTATCAAATATATAGATGTTTA TCAAGGCTTCGTACTAGATTTTGAGCAATATACAAACAGTGATATAGAAGAATTTGACGATTGCGACCATGATATTGATG ATAGTAATGAAGATAAAAGTCAGAAAGGTAACCAAGATAATATCATATTTATTGATACATTCCTGAAAAAATAA
Upstream 100 bases:
>100_bases TGCTAACTTAGTAGCTGCTTAGTTTTATTATTAGCGCGGTTTTTTTAAGGGTTTTCCGGGCAACAGAAAAACCCTTTTTT ATATGATCAGAAACTTGTTT
Downstream 100 bases:
>100_bases AATTTTTACGCTTTATTACAACAAATTCATTAATGTAATTCTTGGTATAGTATAAATCTTCACCTAGTGTTTATTCATTA TGTAGTTTTTTGTATTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSNVIDYQKLMHAAMCSVVKNALTVVAQSEHFYNVHIAISFLTHYKGVTLPEHVKNNYPQEITVILQHQFRSLQVFDNSA SVVLSFRGKEETVVIPYQSIIKYIDVYQGFVLDFEQYTNSDIEEFDDCDHDIDDSNEDKSQKGNQDNIIFIDTFLKK
Sequences:
>Translated_157_residues MSNVIDYQKLMHAAMCSVVKNALTVVAQSEHFYNVHIAISFLTHYKGVTLPEHVKNNYPQEITVILQHQFRSLQVFDNSA SVVLSFRGKEETVVIPYQSIIKYIDVYQGFVLDFEQYTNSDIEEFDDCDHDIDDSNEDKSQKGNQDNIIFIDTFLKK >Mature_156_residues SNVIDYQKLMHAAMCSVVKNALTVVAQSEHFYNVHIAISFLTHYKGVTLPEHVKNNYPQEITVILQHQFRSLQVFDNSAS VVLSFRGKEETVVIPYQSIIKYIDVYQGFVLDFEQYTNSDIEEFDDCDHDIDDSNEDKSQKGNQDNIIFIDTFLKK
Specific function: Unknown
COG id: COG3814
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18161; Mature: 18029
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVIDYQKLMHAAMCSVVKNALTVVAQSEHFYNVHIAISFLTHYKGVTLPEHVKNNYPQ CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEHHHHCCCCCHHHHHCCCCH EITVILQHQFRSLQVFDNSASVVLSFRGKEETVVIPYQSIIKYIDVYQGFVLDFEQYTNS HHHHHHHHHHCEEEEECCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHEEHHHHCCC DIEEFDDCDHDIDDSNEDKSQKGNQDNIIFIDTFLKK CHHHHHCCCCCCCCCCCCHHHCCCCCCEEEEECCCCC >Mature Secondary Structure SNVIDYQKLMHAAMCSVVKNALTVVAQSEHFYNVHIAISFLTHYKGVTLPEHVKNNYPQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEHHHHCCCCCHHHHHCCCCH EITVILQHQFRSLQVFDNSASVVLSFRGKEETVVIPYQSIIKYIDVYQGFVLDFEQYTNS HHHHHHHHHHCEEEEECCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHEEHHHHCCC DIEEFDDCDHDIDDSNEDKSQKGNQDNIIFIDTFLKK CHHHHHCCCCCCCCCCCCHHHCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA