| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658549
Identifier: 88658549
GI number: 88658549
Start: 962402
End: 963079
Strand: Reverse
Name: 88658549
Synonym: ECH_0943
Alternate gene names: NA
Gene position: 963079-962402 (Counterclockwise)
Preceding gene: 88657948
Following gene: 88657632
Centisome position: 81.88
GC content: 25.81
Gene sequence:
>678_bases GTGTTTTATTATAACATACTTGATTCTAAGGCATTGTATAATAGTTTTATTAATAGTATGCAAGTGATTTATATTGTTAA TGTGATATTAATATTCTGTATAACTGGGGTTGTATTACATAATTTTTATGGCATTGATAATGATAAAATTGTGGAATTTG GTTTGTTGAATGATGTGGAATTTGTAAAAAGTGATGATTGTTTTTTTAGAGATTCAAATCAAAAAATAAAATTGTTTCCA GTAAATAGTGAGCTTATATCTGTTGTAGATTTGCAGGATTGGTATTATCGCTTGTTGGAGCAAGAAAATAGTTTAAAAGA TAAAGAGGCTTTGCTAAAAATTGCTGGGCAGCATAATAATGATCAAATGTTATATTTAGAAGAGATGAAAAAAAATTTAG TATCATTGATTAATATTAGTACTCAAAATTATGATGAAAAAGTGCATGGTTTAGTAAAAATATATGAAAGTATACCTGTA GAATTGGCTGCTGAAGTCTTTGAATTGTTGGATATAGATTCATTAATGTTAATAGCTAATAATATTGATAAGGATATTTT GTCGGATATATTGTTACATGCAAGTACAAATGTAGTTGAAAAGATTAAAGAGATATCTGCAAATATATCTAAGCAGCAAT GTAATTATAATAATGGTGTTGTTAAAAATAACGTTTAG
Upstream 100 bases:
>100_bases ACGCCTTCATTAATTTTATGTTCTTAAAGTATTTTAGATATAAGCAGTATAAGCAGTGTCAATATAAATACTACTAATTA TTTATTGCTAAATCACAATA
Downstream 100 bases:
>100_bases TTATTGTACTACATCATATAAGTTAACAATGAGTTATTTGTTCTCAGATTTTGTACCAGATAATACAGTATGTAATTGCA TAAGATCCTTTATGGTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MFYYNILDSKALYNSFINSMQVIYIVNVILIFCITGVVLHNFYGIDNDKIVEFGLLNDVEFVKSDDCFFRDSNQKIKLFP VNSELISVVDLQDWYYRLLEQENSLKDKEALLKIAGQHNNDQMLYLEEMKKNLVSLINISTQNYDEKVHGLVKIYESIPV ELAAEVFELLDIDSLMLIANNIDKDILSDILLHASTNVVEKIKEISANISKQQCNYNNGVVKNNV
Sequences:
>Translated_225_residues MFYYNILDSKALYNSFINSMQVIYIVNVILIFCITGVVLHNFYGIDNDKIVEFGLLNDVEFVKSDDCFFRDSNQKIKLFP VNSELISVVDLQDWYYRLLEQENSLKDKEALLKIAGQHNNDQMLYLEEMKKNLVSLINISTQNYDEKVHGLVKIYESIPV ELAAEVFELLDIDSLMLIANNIDKDILSDILLHASTNVVEKIKEISANISKQQCNYNNGVVKNNV >Mature_225_residues MFYYNILDSKALYNSFINSMQVIYIVNVILIFCITGVVLHNFYGIDNDKIVEFGLLNDVEFVKSDDCFFRDSNQKIKLFP VNSELISVVDLQDWYYRLLEQENSLKDKEALLKIAGQHNNDQMLYLEEMKKNLVSLINISTQNYDEKVHGLVKIYESIPV ELAAEVFELLDIDSLMLIANNIDKDILSDILLHASTNVVEKIKEISANISKQQCNYNNGVVKNNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25916; Mature: 25916
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYYNILDSKALYNSFINSMQVIYIVNVILIFCITGVVLHNFYGIDNDKIVEFGLLNDVE CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHH FVKSDDCFFRDSNQKIKLFPVNSELISVVDLQDWYYRLLEQENSLKDKEALLKIAGQHNN HHCCCCCEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC DQMLYLEEMKKNLVSLINISTQNYDEKVHGLVKIYESIPVELAAEVFELLDIDSLMLIAN CCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH NIDKDILSDILLHASTNVVEKIKEISANISKQQCNYNNGVVKNNV CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCCCEECCCC >Mature Secondary Structure MFYYNILDSKALYNSFINSMQVIYIVNVILIFCITGVVLHNFYGIDNDKIVEFGLLNDVE CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHH FVKSDDCFFRDSNQKIKLFPVNSELISVVDLQDWYYRLLEQENSLKDKEALLKIAGQHNN HHCCCCCEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC DQMLYLEEMKKNLVSLINISTQNYDEKVHGLVKIYESIPVELAAEVFELLDIDSLMLIAN CCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH NIDKDILSDILLHASTNVVEKIKEISANISKQQCNYNNGVVKNNV CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA