Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
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Accession | NC_007799 |
Length | 1,176,248 |
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The map label for this gene is 88658459
Identifier: 88658459
GI number: 88658459
Start: 1056642
End: 1058894
Strand: Reverse
Name: 88658459
Synonym: ECH_1036
Alternate gene names: NA
Gene position: 1058894-1056642 (Counterclockwise)
Preceding gene: 88657949
Following gene: 88657771
Centisome position: 90.02
GC content: 31.2
Gene sequence:
>2253_bases ATGTTTAGGCATATTTTTAATATTGTAAAAGGAGTCTTATATATATTTATATTGACATTTTGTGTGGGTACTACATGTGT GTTTGGATATGAAGAGATTTTTAATGCAAAACCTAGTCTGAGTTATAAATCTCTACGTTTTTGTAATGATAAGATAAAAT TGGCAAATCTTTTTTTTGAAACTACTGTTAATGCAGGGGAGTGTAAAAGTGTAGGATCATCTTCAATGTACTGTATCGCT TATATTGATGAAAGTGATTTTATGCATCCAAAGCTGTGTATGTGTCAAGTATATTCTTGTGAAAATTTGCCAGTTAACCA ATCAGAATGGGGTACAAAGTGTGAGACTAGTATAATGTGTGAAAAAATATCTTCAAAACCACTTCCTATGGTATTTTGTC CTTTATTACTTGAAGAGAAAAATAGCATAAGATTTGTACCAGTAGAGTTTTCGCGCCAGACATTCTTTAAACCAGGTATT AGACTTATAATAGTAGATAATGGAAGTTTGTATAAACGAGACTTTTTCTTATTTGAGAATGATGTAATAGGGGGAGATTA TAAAGTTGCATTTTCTGGAAAGTTGTATGAGTTTAGAATATATAGGTCAGGACATAATCTAATATGTGCTAGTTATTATG ATCAAGGGAATTTTATGACTAAATGTGTTCCTATTCCTGTATTGTCTAAACTAAAGTTAAGTGAACATAAAAATGGTACA ATGGAGATAAGATTTTATGATGTAATGACTTCAGAAAAAGGTAACCTTATTGATAATAGAATTATGCGTGATTTTAATGT TGATATTGTAAGGCCTAAAATTGATGTTAATAGTCATGACTTCTATTTGTACGAGCAATGCCAAAATGGGAAAATCTTGA AACTACATGAATATTGCGGAAATAATGAAGTAAGTAGGGTAAGATACAAGCATGATAATAAAATTACAGTAAAATGTGTA GATGGTATAAGCGCAATTTTCGGATATGTGTTGAAGTCTCGTGAGAAATATGAAGAATACGATAAACACACTTGGCTTAA ACCTTTGCCGAGTGGAATGGTACGTTATGTACGTGTACATGAGAAAAAATATATTCAATGTGCTGATTATGAATATGATA TAACGAATAAAACGCAGGATTTTTTAGATGATCTTTTCATAAATGGAGATGGTTACTATTTCTTTCCTGATGAACAGTAT AGCAATAGGATAACCAATATCTATCCAGATGATAATCCTTGTAATAGCCTAAAAAATTCATATTATTTGTACCAAAATGC GAAGTTAAAGCTAGAAAGTAGTGAATTTTCAAATCCTGAGATTTTAACTCAGTTTACCAAAGCTAATAGATTTGATGCTT GTGTATTGAGATACTTTGATGTTGACCATAAAAAGATGTTGTCTTTAGATACAAAATTACAAAGTGAACTGCAGTTTTTA GATTATCATTCTATGGGGATGTGTGTTGATCATTTTGAAAGTAAAACATATGCAGTGGAAAAAATTGCACCACATGATAA TACTTTAGATTCTGCCTTGTTGAAGTTTCAGGAACAGTTAAAAAATGACAAGCATGTGGATGTATTACTGCGTTATCCAA AGCTAACTGATGTATATAATGTGCCTAGCAGATGTGACTTTGTAAAAGTGGAAATCTGGAGTGGAGGGCAATCTGGTAAA ATTGATATAGAAAATTGGAAAAGTGAAGAAGGACAACCTGGTGAATATGTTATGGGTATGTTTAAAACAGGAAAATCTAA TAAATATTTTATAAAAGTACATTTACAAGGTATTCGTGATCAAGTTCTTGACAATGAGCATACTGTAGGAACAGATGCTA TGATTGAATTTTGTAAGAGAGATAAATATTCACATAATGGTGAAGTTTGTGAGGTGAAATTGACAGCGAATGGAGCTGGG AAATTACTTAATGATATGAAAAAAAGGATAAAAAGTAATAAGTTAGTTCATGATAAGAAGATGTTATATTATAGAATAGT TAATAATTATGTAACCCGTCACTCAGAAAATGTACCAGATGGTAAGAGAATAAGATTTATACCATATCAAGACTTTATGA CAGAAGTTTTGTGGGAGGAAATAGGTAAGAATGAATGTAACTCAGGGAAGCTTTTAGCTGAAAATAATAGTAATTATTTT GGAGCTGGTGGTTGTGCAGATGTTAATACTCAATCTACTGAGAAAGGAGCAGGCGGTATAGTAAAGATTACCTGTGAAGA TTGGTATCAATAG
Upstream 100 bases:
>100_bases ATATTATATTTATTATAAAATATGGTTAATATGAATAAATATTTATGTTAACATATTAAGCATTACTATAATTTTCTTTT CTATTTAAGTATATATATTT
Downstream 100 bases:
>100_bases GTTATGTGTTTGTATATTTGTATATTATCAATCAGAGAATGTACCAGATGGTAAGAGAATAAGATTTATACCATATCAGG ACTTTATGACAGAAGTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 750; Mature: 750
Protein sequence:
>750_residues MFRHIFNIVKGVLYIFILTFCVGTTCVFGYEEIFNAKPSLSYKSLRFCNDKIKLANLFFETTVNAGECKSVGSSSMYCIA YIDESDFMHPKLCMCQVYSCENLPVNQSEWGTKCETSIMCEKISSKPLPMVFCPLLLEEKNSIRFVPVEFSRQTFFKPGI RLIIVDNGSLYKRDFFLFENDVIGGDYKVAFSGKLYEFRIYRSGHNLICASYYDQGNFMTKCVPIPVLSKLKLSEHKNGT MEIRFYDVMTSEKGNLIDNRIMRDFNVDIVRPKIDVNSHDFYLYEQCQNGKILKLHEYCGNNEVSRVRYKHDNKITVKCV DGISAIFGYVLKSREKYEEYDKHTWLKPLPSGMVRYVRVHEKKYIQCADYEYDITNKTQDFLDDLFINGDGYYFFPDEQY SNRITNIYPDDNPCNSLKNSYYLYQNAKLKLESSEFSNPEILTQFTKANRFDACVLRYFDVDHKKMLSLDTKLQSELQFL DYHSMGMCVDHFESKTYAVEKIAPHDNTLDSALLKFQEQLKNDKHVDVLLRYPKLTDVYNVPSRCDFVKVEIWSGGQSGK IDIENWKSEEGQPGEYVMGMFKTGKSNKYFIKVHLQGIRDQVLDNEHTVGTDAMIEFCKRDKYSHNGEVCEVKLTANGAG KLLNDMKKRIKSNKLVHDKKMLYYRIVNNYVTRHSENVPDGKRIRFIPYQDFMTEVLWEEIGKNECNSGKLLAENNSNYF GAGGCADVNTQSTEKGAGGIVKITCEDWYQ
Sequences:
>Translated_750_residues MFRHIFNIVKGVLYIFILTFCVGTTCVFGYEEIFNAKPSLSYKSLRFCNDKIKLANLFFETTVNAGECKSVGSSSMYCIA YIDESDFMHPKLCMCQVYSCENLPVNQSEWGTKCETSIMCEKISSKPLPMVFCPLLLEEKNSIRFVPVEFSRQTFFKPGI RLIIVDNGSLYKRDFFLFENDVIGGDYKVAFSGKLYEFRIYRSGHNLICASYYDQGNFMTKCVPIPVLSKLKLSEHKNGT MEIRFYDVMTSEKGNLIDNRIMRDFNVDIVRPKIDVNSHDFYLYEQCQNGKILKLHEYCGNNEVSRVRYKHDNKITVKCV DGISAIFGYVLKSREKYEEYDKHTWLKPLPSGMVRYVRVHEKKYIQCADYEYDITNKTQDFLDDLFINGDGYYFFPDEQY SNRITNIYPDDNPCNSLKNSYYLYQNAKLKLESSEFSNPEILTQFTKANRFDACVLRYFDVDHKKMLSLDTKLQSELQFL DYHSMGMCVDHFESKTYAVEKIAPHDNTLDSALLKFQEQLKNDKHVDVLLRYPKLTDVYNVPSRCDFVKVEIWSGGQSGK IDIENWKSEEGQPGEYVMGMFKTGKSNKYFIKVHLQGIRDQVLDNEHTVGTDAMIEFCKRDKYSHNGEVCEVKLTANGAG KLLNDMKKRIKSNKLVHDKKMLYYRIVNNYVTRHSENVPDGKRIRFIPYQDFMTEVLWEEIGKNECNSGKLLAENNSNYF GAGGCADVNTQSTEKGAGGIVKITCEDWYQ >Mature_750_residues MFRHIFNIVKGVLYIFILTFCVGTTCVFGYEEIFNAKPSLSYKSLRFCNDKIKLANLFFETTVNAGECKSVGSSSMYCIA YIDESDFMHPKLCMCQVYSCENLPVNQSEWGTKCETSIMCEKISSKPLPMVFCPLLLEEKNSIRFVPVEFSRQTFFKPGI RLIIVDNGSLYKRDFFLFENDVIGGDYKVAFSGKLYEFRIYRSGHNLICASYYDQGNFMTKCVPIPVLSKLKLSEHKNGT MEIRFYDVMTSEKGNLIDNRIMRDFNVDIVRPKIDVNSHDFYLYEQCQNGKILKLHEYCGNNEVSRVRYKHDNKITVKCV DGISAIFGYVLKSREKYEEYDKHTWLKPLPSGMVRYVRVHEKKYIQCADYEYDITNKTQDFLDDLFINGDGYYFFPDEQY SNRITNIYPDDNPCNSLKNSYYLYQNAKLKLESSEFSNPEILTQFTKANRFDACVLRYFDVDHKKMLSLDTKLQSELQFL DYHSMGMCVDHFESKTYAVEKIAPHDNTLDSALLKFQEQLKNDKHVDVLLRYPKLTDVYNVPSRCDFVKVEIWSGGQSGK IDIENWKSEEGQPGEYVMGMFKTGKSNKYFIKVHLQGIRDQVLDNEHTVGTDAMIEFCKRDKYSHNGEVCEVKLTANGAG KLLNDMKKRIKSNKLVHDKKMLYYRIVNNYVTRHSENVPDGKRIRFIPYQDFMTEVLWEEIGKNECNSGKLLAENNSNYF GAGGCADVNTQSTEKGAGGIVKITCEDWYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87045; Mature: 87045
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRHIFNIVKGVLYIFILTFCVGTTCVFGYEEIFNAKPSLSYKSLRFCNDKIKLANLFFE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHCCCCEEEEEEEEE TTVNAGECKSVGSSSMYCIAYIDESDFMHPKLCMCQVYSCENLPVNQSEWGTKCETSIMC ECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH EKISSKPLPMVFCPLLLEEKNSIRFVPVEFSRQTFFKPGIRLIIVDNGSLYKRDFFLFEN HHHCCCCCCCEECHHHHCCCCCEEEEEEECCCCHHCCCCEEEEEECCCCEEEEEEEEEEC DVIGGDYKVAFSGKLYEFRIYRSGHNLICASYYDQGNFMTKCVPIPVLSKLKLSEHKNGT CCCCCCEEEEECCEEEEEEEEECCCCEEEEEEECCCCEEEEEECCCHHHHHEHHCCCCCE MEIRFYDVMTSEKGNLIDNRIMRDFNVDIVRPKIDVNSHDFYLYEQCQNGKILKLHEYCG EEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCEEEEHHHCC NNEVSRVRYKHDNKITVKCVDGISAIFGYVLKSREKYEEYDKHTWLKPLPSGMVRYVRVH CCCCEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EKKYIQCADYEYDITNKTQDFLDDLFINGDGYYFFPDEQYSNRITNIYPDDNPCNSLKNS CCCEEEEECEEECCCCCHHHHHHHEEECCCCEEECCCHHHCCCCCEECCCCCCHHHHCCC YYLYQNAKLKLESSEFSNPEILTQFTKANRFDACVLRYFDVDHKKMLSLDTKLQSELQFL EEEEECCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH DYHSMGMCVDHFESKTYAVEKIAPHDNTLDSALLKFQEQLKNDKHVDVLLRYPKLTDVYN HHCCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC VPSRCDFVKVEIWSGGQSGKIDIENWKSEEGQPGEYVMGMFKTGKSNKYFIKVHLQGIRD CCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCHHEEEEEECCCCCEEEEEEEEECHHH QVLDNEHTVGTDAMIEFCKRDKYSHNGEVCEVKLTANGAGKLLNDMKKRIKSNKLVHDKK HHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHH MLYYRIVNNYVTRHSENVPDGKRIRFIPYQDFMTEVLWEEIGKNECNSGKLLAENNSNYF HHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEE GAGGCADVNTQSTEKGAGGIVKITCEDWYQ CCCCCCCCCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MFRHIFNIVKGVLYIFILTFCVGTTCVFGYEEIFNAKPSLSYKSLRFCNDKIKLANLFFE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHCCCCEEEEEEEEE TTVNAGECKSVGSSSMYCIAYIDESDFMHPKLCMCQVYSCENLPVNQSEWGTKCETSIMC ECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH EKISSKPLPMVFCPLLLEEKNSIRFVPVEFSRQTFFKPGIRLIIVDNGSLYKRDFFLFEN HHHCCCCCCCEECHHHHCCCCCEEEEEEECCCCHHCCCCEEEEEECCCCEEEEEEEEEEC DVIGGDYKVAFSGKLYEFRIYRSGHNLICASYYDQGNFMTKCVPIPVLSKLKLSEHKNGT CCCCCCEEEEECCEEEEEEEEECCCCEEEEEEECCCCEEEEEECCCHHHHHEHHCCCCCE MEIRFYDVMTSEKGNLIDNRIMRDFNVDIVRPKIDVNSHDFYLYEQCQNGKILKLHEYCG EEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCEEEEHHHCC NNEVSRVRYKHDNKITVKCVDGISAIFGYVLKSREKYEEYDKHTWLKPLPSGMVRYVRVH CCCCEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EKKYIQCADYEYDITNKTQDFLDDLFINGDGYYFFPDEQYSNRITNIYPDDNPCNSLKNS CCCEEEEECEEECCCCCHHHHHHHEEECCCCEEECCCHHHCCCCCEECCCCCCHHHHCCC YYLYQNAKLKLESSEFSNPEILTQFTKANRFDACVLRYFDVDHKKMLSLDTKLQSELQFL EEEEECCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH DYHSMGMCVDHFESKTYAVEKIAPHDNTLDSALLKFQEQLKNDKHVDVLLRYPKLTDVYN HHCCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC VPSRCDFVKVEIWSGGQSGKIDIENWKSEEGQPGEYVMGMFKTGKSNKYFIKVHLQGIRD CCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCHHEEEEEECCCCCEEEEEEEEECHHH QVLDNEHTVGTDAMIEFCKRDKYSHNGEVCEVKLTANGAGKLLNDMKKRIKSNKLVHDKK HHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHH MLYYRIVNNYVTRHSENVPDGKRIRFIPYQDFMTEVLWEEIGKNECNSGKLLAENNSNYF HHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEE GAGGCADVNTQSTEKGAGGIVKITCEDWYQ CCCCCCCCCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA