Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
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Accession | NC_007799 |
Length | 1,176,248 |
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The map label for this gene is 88658442
Identifier: 88658442
GI number: 88658442
Start: 1077396
End: 1077767
Strand: Reverse
Name: 88658442
Synonym: ECH_1047
Alternate gene names: NA
Gene position: 1077767-1077396 (Counterclockwise)
Preceding gene: 88657978
Following gene: 88657964
Centisome position: 91.63
GC content: 36.29
Gene sequence:
>372_bases ATGGTGTATAATATAAGTAAGTATTTTATAGGTAGAGCTCTTCTATTTTTGCTGCTCTTAATGTTTTCTGTAGCACCAAA TGTAAGTGATGCTAATACTGGTGGTCAAGCAGGAGATGATACAGTTACTAAGGTGATATGTAATGTTGTTGTGTTTGTGC AAAAATTGGGGTTGCCAATCATGACAGGGGTAATCCTTGGTTCAAGTGTTATGGCAATATTTGGTAGGCTACCATGGCCA GCAATAGTAATGTTAGTTGTGTTTACAGCTATATTCTTTGGGGCAGGTAAGCTGATATCTAAATTTGCTGGTGGAATAAC AGAACTTTCAGCTGATAAGTTTGATTGTAGTTCAATATCAAAAGGTCCTTAA
Upstream 100 bases:
>100_bases TTATATAAACTAATTTTTAGGAAAAGTCTTTTATTTATTTAATAAACATTATAGAGTGTTTTGTTGATATTGTTGTTCAT AAATTTGTGAGGGATTAATA
Downstream 100 bases:
>100_bases TTGGTTTATAATGTGATGTATTTTTTTGTTTAATTGTATCTGTTGTTTCTGATATAAAGTAACTTTATTTCTGAAAATTC TTTATAGATTAAGTTAGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MVYNISKYFIGRALLFLLLLMFSVAPNVSDANTGGQAGDDTVTKVICNVVVFVQKLGLPIMTGVILGSSVMAIFGRLPWP AIVMLVVFTAIFFGAGKLISKFAGGITELSADKFDCSSISKGP
Sequences:
>Translated_123_residues MVYNISKYFIGRALLFLLLLMFSVAPNVSDANTGGQAGDDTVTKVICNVVVFVQKLGLPIMTGVILGSSVMAIFGRLPWP AIVMLVVFTAIFFGAGKLISKFAGGITELSADKFDCSSISKGP >Mature_123_residues MVYNISKYFIGRALLFLLLLMFSVAPNVSDANTGGQAGDDTVTKVICNVVVFVQKLGLPIMTGVILGSSVMAIFGRLPWP AIVMLVVFTAIFFGAGKLISKFAGGITELSADKFDCSSISKGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13011; Mature: 13011
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYNISKYFIGRALLFLLLLMFSVAPNVSDANTGGQAGDDTVTKVICNVVVFVQKLGLPI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHH MTGVILGSSVMAIFGRLPWPAIVMLVVFTAIFFGAGKLISKFAGGITELSADKFDCSSIS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC KGP CCC >Mature Secondary Structure MVYNISKYFIGRALLFLLLLMFSVAPNVSDANTGGQAGDDTVTKVICNVVVFVQKLGLPI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHH MTGVILGSSVMAIFGRLPWPAIVMLVVFTAIFFGAGKLISKFAGGITELSADKFDCSSIS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC KGP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA