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The map label for this gene is 88658441

Identifier: 88658441

GI number: 88658441

Start: 798754

End: 799278

Strand: Direct

Name: 88658441

Synonym: ECH_0784

Alternate gene names: NA

Gene position: 798754-799278 (Clockwise)

Preceding gene: 88657824

Following gene: 88657960

Centisome position: 67.91

GC content: 27.81

Gene sequence:

>525_bases
ATGAAAGATAATATATGCCACACACATTTGTGGCATTCAAAAAAAACAACAACTAGGTTCCTCGCTATACAAGGAACCTA
TTCTATGATATTTAATAACTATACTATAAATGACATCGATAACTTAATTGATTATCTATATGAAATGAAGGAAGTATTAG
ATTTAATACAGATTGACAATCAGCTACTACTTAAAATTATGAACACAATGCTGTTAACCTTCAATACAATCAATTCAACA
ATTGCAACATTTTTAAATGAGAAATGGTCAATAGACCGCATAAACTTAATTAGCCTTTCTATTATTAAAACCGCAGTTTG
TGAATTAATATGTTCCGATACAGATGCAGTAATCATTATAAACGAATACGTTAATATAGCGAGTCATATATTAGAAAGAA
CAGACGTTAATTTTATTAATGCAATATTAAATCAAGTAAAATTTACAGCACGTCCTGTCCTAAATAAAGGTATAAATTTT
CATATCGAACAAACTGAATCCTCTGCTATTTTTAATAGTACATAA

Upstream 100 bases:

>100_bases
ATGGCAAGAGCAGATATCAATAAAAGAAATGTTGGTGGAAATGCTGCCAAAGCAGCTTTAACGATGATTGAATTACATAA
CAAATTTTTAAGTTAAAATT

Downstream 100 bases:

>100_bases
ATTCATGAGAACAACTAGAAAGAACATAGTTTATAACCTCATATCTACATAATAATGAATAAAAACTATTTCCACAATTA
TCAGATCATATTTCCCCTAG

Product: putative N utilization substance protein B

Products: NA

Alternate protein names: Transcription Termination Factor NusB; Transcription Antitermination Protein NusB; N Utilization Substance Protein B-Like Protein

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKDNICHTHLWHSKKTTTRFLAIQGTYSMIFNNYTINDIDNLIDYLYEMKEVLDLIQIDNQLLLKIMNTMLLTFNTINST
IATFLNEKWSIDRINLISLSIIKTAVCELICSDTDAVIIINEYVNIASHILERTDVNFINAILNQVKFTARPVLNKGINF
HIEQTESSAIFNST

Sequences:

>Translated_174_residues
MKDNICHTHLWHSKKTTTRFLAIQGTYSMIFNNYTINDIDNLIDYLYEMKEVLDLIQIDNQLLLKIMNTMLLTFNTINST
IATFLNEKWSIDRINLISLSIIKTAVCELICSDTDAVIIINEYVNIASHILERTDVNFINAILNQVKFTARPVLNKGINF
HIEQTESSAIFNST
>Mature_174_residues
MKDNICHTHLWHSKKTTTRFLAIQGTYSMIFNNYTINDIDNLIDYLYEMKEVLDLIQIDNQLLLKIMNTMLLTFNTINST
IATFLNEKWSIDRINLISLSIIKTAVCELICSDTDAVIIINEYVNIASHILERTDVNFINAILNQVKFTARPVLNKGINF
HIEQTESSAIFNST

Specific function: Unknown

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20048; Mature: 20048

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDNICHTHLWHSKKTTTRFLAIQGTYSMIFNNYTINDIDNLIDYLYEMKEVLDLIQIDN
CCCCCCHHHHCCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
QLLLKIMNTMLLTFNTINSTIATFLNEKWSIDRINLISLSIIKTAVCELICSDTDAVIII
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEH
NEYVNIASHILERTDVNFINAILNQVKFTARPVLNKGINFHIEQTESSAIFNST
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKDNICHTHLWHSKKTTTRFLAIQGTYSMIFNNYTINDIDNLIDYLYEMKEVLDLIQIDN
CCCCCCHHHHCCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
QLLLKIMNTMLLTFNTINSTIATFLNEKWSIDRINLISLSIIKTAVCELICSDTDAVIII
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEH
NEYVNIASHILERTDVNFINAILNQVKFTARPVLNKGINFHIEQTESSAIFNST
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA