Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
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Accession | NC_007799 |
Length | 1,176,248 |
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The map label for this gene is 88658429
Identifier: 88658429
GI number: 88658429
Start: 1070866
End: 1071039
Strand: Reverse
Name: 88658429
Synonym: ECH_1040
Alternate gene names: NA
Gene position: 1071039-1070866 (Counterclockwise)
Preceding gene: 88657785
Following gene: 88657597
Centisome position: 91.06
GC content: 23.56
Gene sequence:
>174_bases TTGATCACAAGCTTGTTTGTGATAAAAAAATGGAAGTTAGAAAATTTACTTATTTTTTTCAATTTTGGGAAACTGTGCTT TAATAAATTTAAAGTAGTTGATGGATTTCTGTTGAGTATGAAGAATTTGAAGATTAATCATAATATTTTGTATATAGCAT ATCATGTATTGTAA
Upstream 100 bases:
>100_bases TGCATTTTATAAGAAATGTGGAGCTTAAAATTTTACACTGTATGAAATTTATGCAATGTAAATGGACTTAACATAATATT AGTAACATTTGTAGAAGTTG
Downstream 100 bases:
>100_bases AATATAATTTCTGTTCCATATATTGATTCAAATGTTTTATGCACAGATATAGGATAATTATTCTGTTATTCTGTTTTATC GTCTATTATACAAGAAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MITSLFVIKKWKLENLLIFFNFGKLCFNKFKVVDGFLLSMKNLKINHNILYIAYHVL
Sequences:
>Translated_57_residues MITSLFVIKKWKLENLLIFFNFGKLCFNKFKVVDGFLLSMKNLKINHNILYIAYHVL >Mature_57_residues MITSLFVIKKWKLENLLIFFNFGKLCFNKFKVVDGFLLSMKNLKINHNILYIAYHVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6822; Mature: 6822
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSLFVIKKWKLENLLIFFNFGKLCFNKFKVVDGFLLSMKNLKINHNILYIAYHVL CCCEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHEEEEEECEEECCCEEEEEEEEC >Mature Secondary Structure MITSLFVIKKWKLENLLIFFNFGKLCFNKFKVVDGFLLSMKNLKINHNILYIAYHVL CCCEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHEEEEEECEEECCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA