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The map label for this gene is nusG [H]

Identifier: 88658378

GI number: 88658378

Start: 982403

End: 982942

Strand: Reverse

Name: nusG [H]

Synonym: ECH_0957

Alternate gene names: 88658378

Gene position: 982942-982403 (Counterclockwise)

Preceding gene: 88657595

Following gene: 88657759

Centisome position: 83.57

GC content: 30.93

Gene sequence:

>540_bases
ATGAAATATGAATGGTACATTATTCAGGTATCATCTGGTAGCGAAGAGAAAGTTTGTCAAACTATTTTGGAAAATTCTCG
GGTATTAGGCTTGGAAGAGAGTTTCCGTGAAGTGTTTATCCCATATGAAGAAATTACTCGGGTAAAACATAATAAAAAGG
TATTGGTAAAAAGGAAGTTGTCGCCAGGGTATGTGTTTTTGTATATGAGTTTACATGAAAATTCAATGAATTTTATTAGG
AGTATACCTAGGGTATTGAATTTTTTAAATAACGATTTTGGTGTTCCTAAAGTTATTTCAGAAAATGAAATGGAGTCTAT
GCGTAAGAAAATGTGTCAAAGTGTAGTAGATGATACTAGTGTTGTTAATTTTGAAATTGGTGATGAAGTTGTAATTAATG
ATGGATTATTTCAAGATTTCAATGGTAAAGTTGAATATATTAATGATGATAAGAAAATAGCGGGAGTCAGTGTGATGATA
TTTGGTAGACTGACTAAGATAGAATTTAAGTTAGAGCATATACAAAAAGTGGAGGGATAA

Upstream 100 bases:

>100_bases
TTATTTATAGTAATATTAATAATTACTTTTATGTCTGTTTTGTTTTGTTGTGTGGATTTTTTATTTTTGAAGTTGATAAA
GATAGTACTTGGGGTAATTT

Downstream 100 bases:

>100_bases
TCGTGAGTGCTGTTTTAGTATCTAAGATAAATTTGATGATAGAAGCTGGGAAAGCTAATCCTGGACCTAAAATAGCTTCT
GTTTTAGGACCTCGTGGTAT

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKYEWYIIQVSSGSEEKVCQTILENSRVLGLEESFREVFIPYEEITRVKHNKKVLVKRKLSPGYVFLYMSLHENSMNFIR
SIPRVLNFLNNDFGVPKVISENEMESMRKKMCQSVVDDTSVVNFEIGDEVVINDGLFQDFNGKVEYINDDKKIAGVSVMI
FGRLTKIEFKLEHIQKVEG

Sequences:

>Translated_179_residues
MKYEWYIIQVSSGSEEKVCQTILENSRVLGLEESFREVFIPYEEITRVKHNKKVLVKRKLSPGYVFLYMSLHENSMNFIR
SIPRVLNFLNNDFGVPKVISENEMESMRKKMCQSVVDDTSVVNFEIGDEVVINDGLFQDFNGKVEYINDDKKIAGVSVMI
FGRLTKIEFKLEHIQKVEG
>Mature_179_residues
MKYEWYIIQVSSGSEEKVCQTILENSRVLGLEESFREVFIPYEEITRVKHNKKVLVKRKLSPGYVFLYMSLHENSMNFIR
SIPRVLNFLNNDFGVPKVISENEMESMRKKMCQSVVDDTSVVNFEIGDEVVINDGLFQDFNGKVEYINDDKKIAGVSVMI
FGRLTKIEFKLEHIQKVEG

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=176, Percent_Identity=34.0909090909091, Blast_Score=121, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20813; Mature: 20813

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYEWYIIQVSSGSEEKVCQTILENSRVLGLEESFREVFIPYEEITRVKHNKKVLVKRKL
CCEEEEEEEECCCCHHHHHHHHHCCCEEECHHHHHHHHCCCHHHHHHHHCCCEEEEEEEC
SPGYVFLYMSLHENSMNFIRSIPRVLNFLNNDFGVPKVISENEMESMRKKMCQSVVDDTS
CCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
VVNFEIGDEVVINDGLFQDFNGKVEYINDDKKIAGVSVMIFGRLTKIEFKLEHIQKVEG
EEEEECCCEEEEECCCEECCCCEEEEECCCCEEECEEEEEEEEEEHEEHHHHHHHHCCC
>Mature Secondary Structure
MKYEWYIIQVSSGSEEKVCQTILENSRVLGLEESFREVFIPYEEITRVKHNKKVLVKRKL
CCEEEEEEEECCCCHHHHHHHHHCCCEEECHHHHHHHHCCCHHHHHHHHCCCEEEEEEEC
SPGYVFLYMSLHENSMNFIRSIPRVLNFLNNDFGVPKVISENEMESMRKKMCQSVVDDTS
CCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
VVNFEIGDEVVINDGLFQDFNGKVEYINDDKKIAGVSVMIFGRLTKIEFKLEHIQKVEG
EEEEECCCEEEEECCCEECCCCEEEEECCCCEEECEEEEEEEEEEHEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]